RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 FBXO30Q8TB52 745 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 TMEM19Q96HH6 336 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 SERHL2Q9H4I8 314 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 CAMK2AQ9UQM7 478 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 RNF6Q9Y252 685 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 NDUFB5O43674 189 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 OXSR1O95747 527 aaPredicted RBP12.17□□□□□ -0.46
CLK3-218ENST00000566926 BAG2O95816 211 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 ANGPTL1O95841 491 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 EPPINO95925 133 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 IGKV1D-16P01601 117 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 C1QCP02747 245 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 GLI4P10075 376 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 CPN1P15169 458 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 CHMP24386 653 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 COL8A1P27658 744 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 MSX1P28360 303 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 DCTP40126 519 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 SELENOWP63302 87 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 GRAMD1BQ3KR37 738 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
CLK3-218ENST00000566926 CYBRD1Q53TN4 286 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 RIPPLY2Q5TAB7 128 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 AP1ARQ63HQ0 302 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 FIGNL1Q6PIW4 674 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 ARMC8Q8IUR7 673 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 MARVELD2Q8N4S9 558 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 ZNF527Q8NB42 609 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 OR2M3Q8NG83 312 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 OR5D16Q8NGK9 328 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 LILRB4Q8NHJ6 448 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 CDS1Q92903 461 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 RAB8BQ92930 207 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 DSN1Q9H410 356 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 CENPEQ02224 2701 aa12.17□□□□□ -0.46
CLK3-218ENST00000566926 HEATR5AQ86XA9 2040 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 IGLV3-32A0A0A0MS00 114 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 A0A1W2PQD3 144 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 H3BNH8 94 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 M0QX08 132 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 DEAF1O75398 565 aaPredicted RBP12.16□□□□□ -0.46
CLK3-218ENST00000566926 STX11O75558 287 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 PRKD3O94806 890 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 ZNF682O95780 498 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 ITGA2P17301 1181 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 HK1P19367 917 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 CASP9P55211 416 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 GFRA1P56159 465 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 HSPB2Q16082 182 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 ZSWIM7Q19AV6 140 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 GPAT3Q53EU6 434 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 DCST2Q5T1A1 773 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 HIST2H2BCQ6DN03 193 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 RTL6Q6ICC9 239 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 OR4C3Q8NH37 302 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 ZPLD1Q8TCW7 415 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 GEMIN6Q8WXD5 167 aaKnown RBP12.16□□□□□ -0.46
CLK3-218ENST00000566926 SLCO4A1Q96BD0 722 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 PIGQQ9BRB3 760 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 BDH2Q9BUT1 245 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 VCXQ9H320 206 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 EVA1AQ9H8M9 152 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 MTHFD2LQ9H903 347 aaPredicted RBP12.16□□□□□ -0.46
CLK3-218ENST00000566926 CALHM2Q9HA72 323 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 IL1RAPQ9NPH3 570 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 KCNJ16Q9NPI9 418 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 FLRT3Q9NZU0 649 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 MED11Q9P086 117 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 IFT52Q9Y366 437 aa12.16□□□□□ -0.46
CLK3-218ENST00000566926 DSPPQ9NZW4 1301 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 CD8B2A6NJW9 211 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 ZIC3O60481 467 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 H6PDO95479 791 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 IL2RAP01589 272 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 PEPDP12955 493 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 COX6B1P14854 86 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 AQP1P29972 269 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 TIMP3P35625 211 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 MAGEA2P43356 314 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 ERFP50548 548 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 GK3PQ14409 553 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 ATP6AP1Q15904 470 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms