RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ORAI3Q9BRQ5 295 aa15.51■□□□□ 0.07
CMTM3-213ENST00000566756 PCED1AQ9H1Q7 454 aa15.51■□□□□ 0.07
CMTM3-213ENST00000566756 SRMSQ9H3Y6 488 aa15.51■□□□□ 0.07
CMTM3-213ENST00000566756 MALT1Q9UDY8 824 aa15.51■□□□□ 0.07
CMTM3-213ENST00000566756 SC5DO75845 299 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 RASGRP1O95267 797 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 ARSBP15848 533 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 HK1P19367 917 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 THBS2P35442 1172 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 MAP3K8P41279 467 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 FOXK2Q01167 660 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 ZP2Q05996 745 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 INSL4Q14641 139 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 MAPK14Q16539 360 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 AMZ1Q400G9 498 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 WDR88Q6ZMY6 472 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 BMP8AQ7Z5Y6 402 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 PXKQ7Z7A4 578 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SLC22A18ASQ8N1D0 253 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 UBE2J2Q8N2K1 259 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 TMEM99Q8N816 258 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SLC37A3Q8NCC5 494 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 GPBAR1Q8TDU6 330 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 ZFPM2Q8WW38 1151 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 TEAD3Q99594 435 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 ZNF559Q9BR84 538 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 PLSCR3Q9NRY6 295 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 ZNF624Q9P2J8 865 aaPredicted RBP15.5■□□□□ 0.07
CMTM3-213ENST00000566756 IL20RAQ9UHF4 553 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SIGLEC7Q9Y286 467 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 MED31Q9Y3C7 131 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SIRT4Q9Y6E7 314 aaPredicted RBP15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SPACA6W5XKT8 324 aa15.5■□□□□ 0.07
CMTM3-213ENST00000566756 SPTY2D1-AS1A0A0U1RR47 76 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 INMT-MINDY4F8WBC2 141 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 SCAMP1O15126 338 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 ARHGEF9O43307 516 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 EML2O95834 649 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 CSTF1Q05048 431 aaKnown RBP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 ILF3Q12906 894 aaKnown RBP eCLIP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 MAB21L1Q13394 359 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 MANEAQ5SRI9 462 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 IDNKQ5T6J7 187 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 NR2C2APQ86WQ0 139 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 CCL4L1Q8NHW4 92 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PTP4A1Q93096 173 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 BPIFA2Q96DR5 249 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 MFRPQ9BY79 579 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 MRPL39Q9NYK5 338 aaKnown RBP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PILRAQ9UKJ1 303 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 BOLA1Q9Y3E2 137 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 CENPVL1A0A0U1RR11 272 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 RIIAD1A6NNX1 92 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PTP4A3O75365 173 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 SBK2P0C263 348 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PRG2P13727 222 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 SLC2A5P22732 501 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PITPNBP48739 271 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 SIM1P81133 766 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 DEFB134Q4QY38 66 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 ZNF57Q68EA5 555 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PYHIN1Q6K0P9 492 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PAMR1Q6UXH9 720 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 MS4A15Q8N5U1 240 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 COX18Q8N8Q8 333 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 PFN4Q8NHR9 129 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 AKAP1Q92667 903 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■■□□ 17.2
CMTM3-213ENST00000566756 HOXB13Q92826 284 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-213ENST00000566756 RFT1Q96AA3 541 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 FOXQ1Q9C009 403 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 IL21RQ9HBE5 538 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 ENAMQ9NRM1 1142 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 NPFFR2Q9Y5X5 522 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 CLCA3PQ9Y6N3 262 aa15.49■□□□□ 0.07
CMTM3-213ENST00000566756 ANKRD61A6NGH8 418 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 THEGLP0DJG4 465 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 RBM34P42696 430 aaKnown RBP15.48■□□□□ 0.07
CMTM3-213ENST00000566756 TRMT12Q53H54 448 aaKnown RBP15.48■□□□□ 0.07
CMTM3-213ENST00000566756 PLA1AQ53H76 456 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 Q5BKY6 102 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 SFXN4Q6P4A7 337 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 SPEM1Q8N4L4 309 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 DEFB123Q8N688 67 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 CADM4Q8NFZ8 388 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 CLDN23Q96B33 292 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 GSDMCQ9BYG8 508 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 TPSD1Q9BZJ3 242 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 C20orf141Q9NUB4 165 aa15.48■□□□□ 0.07
CMTM3-213ENST00000566756 A0A0G2JMP0 313 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 A0A0X1KG70 313 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 P2RX6O15547 441 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 CHP2O43745 196 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 BRINP1O60477 761 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 ZNF3P17036 446 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 DRD5P21918 477 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 EIF2B5Q13144 721 aaKnown RBP15.47■□□□□ 0.07
CMTM3-213ENST00000566756 FZD2Q14332 565 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 CCNJQ5T5M9 372 aa15.47■□□□□ 0.07
CMTM3-213ENST00000566756 VASH1Q7L8A9 365 aaPredicted RBP15.47■□□□□ 0.07
CMTM3-213ENST00000566756 GRAMD2AQ8IUY3 354 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms