RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SRRQ9GZT4 340 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 MALT1Q9UDY8 824 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 FBXL21Q9UKT6 434 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 SDK1Q7Z5N4 2213 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 TRDV1A0A1B0GX56 115 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 HCN1O60741 890 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 PRAMEF2O60811 474 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 ZNF217O75362 1048 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 NSA2O95478 260 aaKnown RBP17.23■□□□□ 0.35
MSLN-207ENST00000566549 GPR3P46089 330 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 GXYLT1Q4G148 440 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 DDI2Q5TDH0 399 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 CD200R1LQ6Q8B3 271 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 WDFY2Q96P53 400 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 TEAD3Q99594 435 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 FOXQ1Q9C009 403 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 RPS6KB2Q9UBS0 482 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 CLCA3PQ9Y6N3 262 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 FABP12A6NFH5 140 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 RIIAD1A6NNX1 92 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 CHURC1-FNTBB4DL54 471 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 PTP4A3O75365 173 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 CD27P26842 260 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 FGF9P31371 208 aaPredicted RBP17.23■□□□□ 0.35
MSLN-207ENST00000566549 FNTBP49356 437 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 CTBP2P56545 445 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 SKP1P63208 163 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 TDGQ13569 410 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 NRARPQ7Z6K4 114 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 LRRC17Q8N6Y2 441 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 BCORP1Q8N888 145 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 TIMP4Q99727 224 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 PHF7Q9BWX1 381 aaPredicted RBP17.23■□□□□ 0.35
MSLN-207ENST00000566549 FN3KQ9H479 309 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 MCCC2Q9HCC0 563 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.23■□□□□ 0.35
MSLN-207ENST00000566549 TRAPPC4Q9Y296 219 aa17.23■□□□□ 0.35
MSLN-207ENST00000566549 A0A1W2PQ09 198 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 A0A1W2PR77 199 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 A8MUA0 341 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 CSTAP01040 98 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 HLA-DPB1P04440 258 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 IL7P13232 177 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 ZNF362Q5T0B9 420 aaPredicted RBP17.22■□□□□ 0.35
MSLN-207ENST00000566549 ZBTB8BQ8NAP8 495 aaPredicted RBP17.22■□□□□ 0.35
MSLN-207ENST00000566549 OR51L1Q8NGJ5 315 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 PMM1Q92871 262 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 NEDD4LQ96PU5 975 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 TRIM2Q9C040 744 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 UCKL1Q9NWZ5 548 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 TMCC2O75069 709 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 ALAS2P22557 587 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 RPL6Q02878 288 aaKnown RBP17.22■□□□□ 0.35
MSLN-207ENST00000566549 FGFBP1Q14512 234 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 ARMC4Q5T2S8 1044 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 PRAMEF17Q5VTA0 474 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 RPL13AP3Q6NVV1 102 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 ZNF321PQ8N8H1 164 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 OR6C4Q8NGE1 309 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 MED18Q9BUE0 208 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 PLCL2Q9UPR0 1127 aa17.22■□□□□ 0.35
MSLN-207ENST00000566549 CCDC182A6NF36 153 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 METTL12A8MUP2 240 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 E9PI62 339 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 IFI6P09912 130 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ZNF3P17036 446 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 GABRA4P48169 554 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 TMEM91Q6ZNR0 172 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 GRAMD2AQ8IUY3 354 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 MSANTD3Q96H12 275 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ERMAPQ96PL5 475 aaPredicted RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 PDE7BQ9NP56 450 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 BABAM2Q9NXR7 383 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 SLC35A3Q9Y2D2 325 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 SLC22A31A6NKX4 558 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 RNF13O43567 381 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 CD1CP29017 333 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 OR1D4P47884 311 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 HCCSP53701 268 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ATP12AP54707 1039 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 KRR1Q13601 381 aaKnown RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 FHL1Q13642 323 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 GLYR1Q49A26 553 aaPredicted RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 SNAP47Q5SQN1 464 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ARL9Q6T311 187 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 RPTNQ6XPR3 784 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 TTLL10Q6ZVT0 673 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 UBE2J2Q8N2K1 259 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 OR4K13Q8NH42 304 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 AP3S1Q92572 193 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 SMAD5Q99717 465 aaKnown RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 G6PC3Q9BUM1 346 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 ZNF426Q9BUY5 554 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 SLC2A4RGQ9NR83 387 aa17.21■□□□□ 0.35
MSLN-207ENST00000566549 PNO1Q9NRX1 252 aaKnown RBP17.21■□□□□ 0.35
MSLN-207ENST00000566549 HPGDSO60760 199 aa17.2■□□□□ 0.34
MSLN-207ENST00000566549 NUDT1P36639 197 aa17.2■□□□□ 0.34
MSLN-207ENST00000566549 IGLV3-21P80748 117 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms