RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 HRH3Q9Y5N1 445 aa7.08□□□□□ -1.28
ATXN3-249ENST00000564606 ETV7Q9Y603 341 aa7.08□□□□□ -1.28
ATXN3-249ENST00000564606 HS3ST3A1Q9Y663 406 aa7.08□□□□□ -1.28
ATXN3-249ENST00000564606 SESN1Q9Y6P5 492 aa7.08□□□□□ -1.28
ATXN3-249ENST00000564606 DENND4AQ7Z401 1863 aa7.08□□□□□ -1.28
ATXN3-249ENST00000564606 IGKV1-8A0A0C4DH67 115 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 A0A0G2JN53 185 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 A0A0J9YY10 115 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 A0A1W2PP55 124 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 C7orf66A4D0T2 115 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 J3QLW9 94 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ARPC3O15145 178 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 OGG1O15527 345 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 BRINP1O60477 761 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SRPX2O60687 465 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 PRAMEF2O60811 474 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF780AO75290 641 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 NKX2-2O95096 273 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CH25HO95992 272 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TNFP01375 233 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 RAF1P04049 648 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CLEC2LP0C7M8 214 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 C8orf89P0DMQ9 161 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CALCBP10092 127 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF19P17023 458 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 HNRNPA2B1P22626 353 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 GRK6P43250 576 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TGM4P49221 684 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 GMFBP60983 142 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SSBP1Q04837 148 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 MAP4K2Q12851 820 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF155Q12901 538 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 EIF2B5Q13144 721 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SNTB2Q13425 540 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SERTAD2Q14140 314 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 NDUFAF6Q330K2 333 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 FLYWCH1Q4VC44 716 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ACSM3Q53FZ2 586 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZMAT1Q5H9K5 638 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 EMC4Q5J8M3 183 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CEP78Q5JTW2 689 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SNAP47Q5SQN1 464 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 MRPL2Q5T653 305 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ARL9Q6T311 187 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 PAQR6Q6TCH4 344 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 BTN2A1Q7KYR7 527 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 KRT74Q7RTS7 529 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 PXKQ7Z7A4 578 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 JAZF1Q86VZ6 243 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 NKAIN4Q8IVV8 208 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SLC35F3Q8IY50 421 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF595Q8IYB9 648 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 OR6V1Q8N148 313 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 FAM98AQ8NCA5 519 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SLC16A11Q8NCK7 471 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 OR8D4Q8NGM9 314 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SNIP1Q8TAD8 396 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TMEM255BQ8WV15 326 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 KAT2AQ92830 837 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TRIM43Q96BQ3 446 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SMIM19Q96E16 107 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SGTBQ96EQ0 304 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TRMT61AQ96FX7 289 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 C16orf58Q96GQ5 468 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 C10orf90Q96M02 699 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 LGR4Q9BXB1 951 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 DPH1Q9BZG8 443 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SPRTNQ9H040 489 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 TMEM168Q9H0V1 697 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 MIR1-1HGQ9H1L0 117 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 KLHL31Q9H511 634 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 XKR8Q9H6D3 395 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 C12orf10Q9HB07 376 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ADAP2Q9NPF8 381 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 NRIP3Q9NQ35 241 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CTPS2Q9NRF8 586 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 UPB1Q9UBR1 384 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 APOBEC3BQ9UH17 382 aaKnown RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SCP2D1Q9UJQ7 156 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SLC6A14Q9UN76 642 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 SIGLEC7Q9Y286 467 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF337Q9Y3M9 751 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 CSNK1G3Q9Y6M4 447 aa7.07□□□□□ -1.28
ATXN3-249ENST00000564606 NUP214P35658 2090 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-249ENST00000564606 A0A0B4J2E0 115 aa7.06□□□□□ -1.28
ATXN3-249ENST00000564606 A0A1B0GX12 115 aa7.06□□□□□ -1.28
ATXN3-249ENST00000564606 UBE2QL1A1L167 161 aa7.06□□□□□ -1.28
ATXN3-249ENST00000564606 CD8B2A6NJW9 211 aa7.06□□□□□ -1.28
ATXN3-249ENST00000564606 CPNE3O75131 537 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms