RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PSMG2Q969U7 264 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 VSIG2Q96IQ7 327 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 SENP8Q96LD8 212 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 SLC6A7Q99884 636 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 CRNKL1Q9BZJ0 848 aaKnown RBP3.51□□□□□ -1.85
LINC00560-201ENST00000564593 PPDPFQ9H3Y8 114 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 ELOVL3Q9HB03 270 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 Q9UF83 564 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 OARD1Q9Y530 152 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 PPIAL4AQ9Y536 164 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 MAD1L1Q9Y6D9 718 aa3.51□□□□□ -1.85
LINC00560-201ENST00000564593 SHPRHQ149N8 1683 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 MED14O60244 1454 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 ABCC11Q96J66 1382 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 EVC2Q86UK5 1308 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 H3BMQ9 156 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 K7EQM0 130 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 SRSF10O75494 262 aaKnown RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 ADCY5O95622 1261 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 PGCP20142 388 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 SERPINA2P20848 420 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 UQCRC2P22695 453 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 PRKAR2BP31323 418 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 PRPHP41219 470 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 MEOX2P50222 304 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 CBX1P83916 185 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 LAGE3Q14657 143 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 SLC5A12Q1EHB4 618 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF658Q5TYW1 1059 aaPredicted RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 PYHIN1Q6K0P9 492 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 FAHD2BQ6P2I3 314 aaPredicted RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 LINC00612Q8N6U2 182 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 MRAPQ8TCY5 172 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 FAHD2AQ96GK7 314 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 SERAC1Q96JX3 654 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 C12orf66Q96MD2 445 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF607Q96SK3 696 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 DEFB126Q9BYW3 111 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 CHMP4BQ9H444 224 aaKnown RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 CAB39LQ9H9S4 337 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 PAK1IP1Q9NWT1 392 aaPredicted RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 SPRR3Q9UBC9 169 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 VSIG4Q9Y279 399 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 MRPS7Q9Y2R9 242 aaKnown RBP3.5□□□□□ -1.85
LINC00560-201ENST00000564593 MYO5BQ9ULV0 1848 aa3.5□□□□□ -1.85
LINC00560-201ENST00000564593 ITSN1Q15811 1721 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 KNDC1Q76NI1 1749 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ADGRB1O14514 1584 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 NEXMIFQ5QGS0 1516 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 NPATQ14207 1427 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ANKRD36BQ8N2N9 1353 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 CABYRO75952 493 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 CALB2P22676 271 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ADORA2BP29275 332 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 RPL29P47914 159 aaKnown RBP3.49□□□□□ -1.85
LINC00560-201ENST00000564593 MRPS11P82912 194 aaKnown RBP3.49□□□□□ -1.85
LINC00560-201ENST00000564593 CSTF1Q05048 431 aaKnown RBP3.49□□□□□ -1.85
LINC00560-201ENST00000564593 SYPL1Q16563 259 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 GGTA1PQ4G0N0 100 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 PAGE2BQ5JRK9 111 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ATAD3BQ5T9A4 648 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ZBED8Q8IZ13 594 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 GPR137CQ8N3F9 429 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 C15orf54Q8N8G6 183 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 RIT2Q99578 217 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 TXN2Q99757 166 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 OMDQ99983 421 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 POLR1EQ9GZS1 481 aaKnown RBP3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF275Q9NSD4 429 aaPredicted RBP3.49□□□□□ -1.85
LINC00560-201ENST00000564593 AIPL1Q9NZN9 384 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 USP16Q9Y5T5 823 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 FLVCR1Q9Y5Y0 555 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ALG6Q9Y672 507 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 SMAD5-AS1Q9Y6J3 95 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 ADGRB2O60241 1585 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 DLC1Q96QB1 1528 aa3.49□□□□□ -1.85
LINC00560-201ENST00000564593 NOS1P29475 1434 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 NSD3Q9BZ95 1437 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 FRMPD4Q14CM0 1322 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 IGLV8-61A0A075B6I0 122 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 DHRS7CA6NNS2 312 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 CDX4O14627 284 aaPredicted RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 MSH4O15457 936 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 MAGEB3O15480 346 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF254O75437 659 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 GPX5O75715 221 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 CA1P00915 261 aaPredicted RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 GIG44P09565 113 aaPredicted RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 IQCF3P0C7M6 154 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 HPCAL1P37235 193 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 PPT1P50897 306 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 AP3M2P53677 418 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 RAB40BQ12829 278 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 TIGITQ495A1 244 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 CFAP157Q5JU67 520 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms