RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SRSF5Q13243 272 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 IMMTQ16891 758 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 OTUD3Q5T2D3 398 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 ARMC12Q5T9G4 340 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PRAMEF5Q5TYX0 476 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PRAMEF6Q5VXH4 476 aa2□□□□□ -2.09
CHD9-209ENST00000564255 LIPNQ5VXI9 398 aa2□□□□□ -2.09
CHD9-209ENST00000564255 SVOPLQ8N434 492 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MCHR1Q99705 422 aa2□□□□□ -2.09
CHD9-209ENST00000564255 DPH7Q9BTV6 452 aa2□□□□□ -2.09
CHD9-209ENST00000564255 NIPAL2Q9H841 368 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CAB39LQ9H9S4 337 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PAK1IP1Q9NWT1 392 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 CLEC5AQ9NY25 188 aa2□□□□□ -2.09
CHD9-209ENST00000564255 RABL2AQ9UBK7 228 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 PDE10AQ9Y233 779 aa2□□□□□ -2.09
CHD9-209ENST00000564255 NPTNQ9Y639 398 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PPIAL4EA0A075B759 164 aa2□□□□□ -2.09
CHD9-209ENST00000564255 A0A0J9YWU9 116 aa2□□□□□ -2.09
CHD9-209ENST00000564255 A0A1B0GWB2 263 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ACOD1A6NK06 481 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF705EA8MWA4 302 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 E9PAM4 449 aa2□□□□□ -2.09
CHD9-209ENST00000564255 E9PBE3 544 aa2□□□□□ -2.09
CHD9-209ENST00000564255 FCN1O00602 326 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CXCL13O43927 109 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CACNG3O60359 315 aa2□□□□□ -2.09
CHD9-209ENST00000564255 NOL4O94818 638 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ALOX5P09917 674 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF853P0CG23 659 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PPIAL4FP0DN26 164 aa2□□□□□ -2.09
CHD9-209ENST00000564255 IGHV1-2P23083 117 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CCR1P32246 355 aa2□□□□□ -2.09
CHD9-209ENST00000564255 HMGCLP35914 325 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CRYBB2P43320 205 aa2□□□□□ -2.09
CHD9-209ENST00000564255 LMO4P61968 165 aa2□□□□□ -2.09
CHD9-209ENST00000564255 OGDHQ02218 1023 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ISXQ2M1V0 245 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PRAMEF20Q5VT98 475 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF497Q6ZNH5 498 aa2□□□□□ -2.09
CHD9-209ENST00000564255 GPRIN3Q6ZVF9 776 aa2□□□□□ -2.09
CHD9-209ENST00000564255 OR2L13Q8N349 312 aa2□□□□□ -2.09
CHD9-209ENST00000564255 BBS5Q8N3I7 341 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MAGEE2Q8TD90 523 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 FAF2Q96CS3 445 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF599Q96NL3 588 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MCCC1Q96RQ3 725 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 RAB34Q9BZG1 259 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ELOVL4Q9GZR5 314 aa2□□□□□ -2.09
CHD9-209ENST00000564255 NAT10Q9H0A0 1025 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 NCOR1P1Q9H4R4 102 aa2□□□□□ -2.09
CHD9-209ENST00000564255 PHF11Q9UIL8 331 aa2□□□□□ -2.09
CHD9-209ENST00000564255 IFT52Q9Y366 437 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CAB39Q9Y376 341 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 PPIAL4AQ9Y536 164 aa2□□□□□ -2.09
CHD9-209ENST00000564255 NOTCH4Q99466 2003 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MYO15BQ96JP2 1530 aa2□□□□□ -2.09
CHD9-209ENST00000564255 DNALI1O14645 258 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 CIB2O75838 187 aa2□□□□□ -2.09
CHD9-209ENST00000564255 LYPD3O95274 346 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CRYGBP07316 175 aa2□□□□□ -2.09
CHD9-209ENST00000564255 QARSP47897 775 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 FNTAP49354 379 aa2□□□□□ -2.09
CHD9-209ENST00000564255 HLCSP50747 726 aa2□□□□□ -2.09
CHD9-209ENST00000564255 RPS8P62241 208 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 MRPL28Q13084 256 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 PLD1Q13393 1074 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CUL1Q13616 776 aa2□□□□□ -2.09
CHD9-209ENST00000564255 KLHL38Q2WGJ6 581 aa2□□□□□ -2.09
CHD9-209ENST00000564255 HIPK1Q86Z02 1210 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF440Q8IYI8 595 aa2□□□□□ -2.09
CHD9-209ENST00000564255 TTC5Q8N0Z6 440 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ST8SIA1Q92185 356 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MRPS31Q92665 395 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 TOMM40LQ969M1 308 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF689Q96CS4 500 aaPredicted RBP2□□□□□ -2.09
CHD9-209ENST00000564255 CYP2S1Q96SQ9 504 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ZNF385DQ9H6B1 395 aa2□□□□□ -2.09
CHD9-209ENST00000564255 AZI2Q9H6S1 392 aa2□□□□□ -2.09
CHD9-209ENST00000564255 POPDC2Q9HBU9 364 aa2□□□□□ -2.09
CHD9-209ENST00000564255 SLC2A8Q9NY64 477 aa2□□□□□ -2.09
CHD9-209ENST00000564255 ARMCX1Q9P291 453 aa2□□□□□ -2.09
CHD9-209ENST00000564255 A0A1B0GVL5 298 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 FRG2CA6NGY1 282 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 CCT8L1PA6NM43 557 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 A8MX80 341 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 SULT2B1O00204 365 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 OR10H3O60404 316 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 SH3BGRLO75368 114 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 GPX5O75715 221 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 IGHV3-13P01766 116 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 ASGR1P07306 291 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 PTBP1P26599 531 aaKnown RBP eCLIP1.99□□□□□ -2.09
CHD9-209ENST00000564255 YWHABP31946 246 aaKnown RBP1.99□□□□□ -2.09
CHD9-209ENST00000564255 XCR1P46094 333 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 ATP1B3P54709 279 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 RPL32P62910 135 aaKnown RBP1.99□□□□□ -2.09
CHD9-209ENST00000564255 CRMP1Q14194 572 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 SLC10A1Q14973 349 aa1.99□□□□□ -2.09
CHD9-209ENST00000564255 FCN2Q15485 313 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms