RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SMAD9O15198 467 aaKnown RBP21.17■□□□□ 0.98
NME3-206ENST00000564252 ITM2AO43736 263 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 STX11O75558 287 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 OR3A2P47893 321 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 Q6ZT83 130 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 ATG4DQ86TL0 474 aaPredicted RBP21.17■□□□□ 0.98
NME3-206ENST00000564252 PRIMA1Q86XR5 153 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 NUDCD3Q8IVD9 361 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 AENQ8WTP8 325 aaKnown RBP21.17■□□□□ 0.98
NME3-206ENST00000564252 ST8SIA1Q92185 356 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 PKNOX2Q96KN3 472 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 POTEKPQ9BYX7 375 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 ZNF350Q9GZX5 532 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 QRSL1Q9H0R6 528 aaKnown RBP21.17■□□□□ 0.98
NME3-206ENST00000564252 ESRP2Q9H6T0 727 aaKnown RBP21.17■□□□□ 0.98
NME3-206ENST00000564252 NGBQ9NPG2 151 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 MKLN1Q9UL63 735 aa21.17■□□□□ 0.98
NME3-206ENST00000564252 OVOL3O00110 214 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 CLOCKO15516 846 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 CYTIPO60759 359 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 CD3EP07766 207 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 DANCRP0C864 163 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 EDNRAP25101 427 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 SESN3P58005 492 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 RPS4XP62701 263 aaKnown RBP21.16■□□□□ 0.98
NME3-206ENST00000564252 RASGEF1BQ0VAM2 473 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 PDCD2Q16342 344 aaPredicted RBP21.16■□□□□ 0.98
NME3-206ENST00000564252 HEPHL1Q6MZM0 1159 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 BHLHA15Q7RTS1 189 aaPredicted RBP21.16■□□□□ 0.98
NME3-206ENST00000564252 OR8J2Q8NGG1 315 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 MIPOL1Q8TD10 442 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 NEUROG1Q92886 237 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 FBXW5Q969U6 566 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 PPP1R36Q96LQ0 422 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 OR5B2Q96R09 309 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 USB1Q9BQ65 265 aaKnown RBP21.16■□□□□ 0.98
NME3-206ENST00000564252 OR51I1Q9H343 314 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 AKTIPQ9H8T0 292 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 PRSS50Q9UI38 385 aa21.16■□□□□ 0.98
NME3-206ENST00000564252 CYP7B1O75881 506 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 CSTAP01040 98 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 SOD3P08294 240 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 CASP9P55211 416 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 MAPK14Q16539 360 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 ZNF781Q8N8C0 355 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 OR4A15Q8NGL6 344 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 PIWIL2Q8TC59 973 aaKnown RBP21.15■□□□□ 0.98
NME3-206ENST00000564252 ZNF75CPQ92670 426 aaPredicted RBP21.15■□□□□ 0.98
NME3-206ENST00000564252 ARL8AQ96BM9 186 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 ZNF300Q96RE9 604 aaPredicted RBP21.15■□□□□ 0.98
NME3-206ENST00000564252 TMEM109Q9BVC6 243 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 ACER3Q9NUN7 267 aa21.15■□□□□ 0.98
NME3-206ENST00000564252 CADP27708 2225 aa21.14■□□□□ 0.98
NME3-206ENST00000564252 ZNF724A8MTY0 619 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 C9JVG2 144 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 INAFM1C9JVW0 142 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 KIAA0513O60268 411 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 SCN2BO60939 215 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 LYZL6O75951 148 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 UBTFL6P0CB48 400 aaPredicted RBP21.14■□□□□ 0.97
NME3-206ENST00000564252 BSPH1Q075Z2 132 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 TNK1Q13470 666 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 ZNF672Q499Z4 452 aaPredicted RBP21.14■□□□□ 0.97
NME3-206ENST00000564252 EMBQ6PCB8 327 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 EIF3MQ7L2H7 374 aaKnown RBP21.14■□□□□ 0.97
NME3-206ENST00000564252 C16orf62Q7Z3J2 963 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 FAM71CQ8NEG0 241 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 ZNF775Q96BV0 537 aaPredicted RBP21.14■□□□□ 0.97
NME3-206ENST00000564252 EXD2Q9NVH0 621 aa21.14■□□□□ 0.97
NME3-206ENST00000564252 DPRXA6NFQ7 191 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 SERPINE1P05121 402 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 GUSBP08236 651 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 OR12D1P0DN82 309 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 PGCP20142 388 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 PGM1P36871 562 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 DIO1P49895 249 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 PHC1P78364 1004 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 MERTKQ12866 999 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 CHI3L2Q15782 390 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 TMPPEQ6ZT21 453 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.13■□□□□ 0.97
NME3-206ENST00000564252 ANKRD46Q86W74 232 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 KBTBD8Q8NFY9 601 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 SMAP2Q8WU79 429 aaPredicted RBP21.13■□□□□ 0.97
NME3-206ENST00000564252 TMEM234Q8WY98 164 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 C20orf27Q9GZN8 174 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 SERINC1Q9NRX5 453 aa21.13■□□□□ 0.97
NME3-206ENST00000564252 MAGED1Q9Y5V3 778 aaPredicted RBP21.13■□□□□ 0.97
NME3-206ENST00000564252 WDR91A4D1P6 747 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 BCAS1O75363 584 aaPredicted RBP21.12■□□□□ 0.97
NME3-206ENST00000564252 FESP07332 822 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 COX5AP20674 150 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 UQCRC2P22695 453 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 ABCE1P61221 599 aaKnown RBP21.12■□□□□ 0.97
NME3-206ENST00000564252 FUT5Q11128 374 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 SYT14P1Q58G82 188 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 AP1ARQ63HQ0 302 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 ABLIM2Q6H8Q1 611 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 TYW3Q6IPR3 259 aaKnown RBP21.12■□□□□ 0.97
NME3-206ENST00000564252 DNAJC14Q6Y2X3 702 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms