RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 KIAA0513O60268 411 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 CYTIPO60759 359 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 H6PDO95479 791 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 CSTAP01040 98 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 SLC7A1P30825 629 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 PGM1P36871 562 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 OR3A2P47893 321 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 SLC1A6P48664 564 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 PTH2RP49190 550 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 SESN3P58005 492 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 MPP2Q14168 576 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 TIGD2Q4W5G0 525 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 SAXO2Q658L1 398 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 OGFOD2Q6N063 350 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 CLEC9AQ6UXN8 241 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 EIF3MQ7L2H7 374 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 WFDC8Q8IUA0 241 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 CLEC4FQ8N1N0 589 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 VPS37AQ8NEZ2 397 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 OR4A15Q8NGL6 344 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 RFWD2Q8NHY2 731 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 TMEM234Q8WY98 164 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 HSD17B8Q92506 261 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 NEURL3Q96EH8 262 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 Q96MF0 132 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 ACER3Q9NUN7 267 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 MKLN1Q9UL63 735 aa15.29■□□□□ 0.04
VPS9D1-203ENST00000563798 A0A1W2PNR3 127 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 ZNF724A8MTY0 619 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 SMAD9O15198 467 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 CNOT4O95628 575 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 PLAUP00749 431 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 LBPP18428 481 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 PGCP20142 388 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 CLNS1AP54105 237 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 ITGADQ13349 1161 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 MAPK14Q16539 360 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 TYW3Q6IPR3 259 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 SEZ6L2Q6UXD5 910 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 DNAJC14Q6Y2X3 702 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 TMPPEQ6ZT21 453 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 Q6ZT83 130 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 C16orf62Q7Z3J2 963 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 CIARTQ8N365 385 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 TMCO5AQ8N6Q1 288 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 SLC25A43Q8WUT9 341 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 TMEM171Q8WVE6 324 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 ZNF75CPQ92670 426 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 PERPQ96FX8 193 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 PARD6BQ9BYG5 372 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 MEAF6Q9HAF1 191 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 NGBQ9NPG2 151 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 SERINC1Q9NRX5 453 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 RAB21Q9UL25 225 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 SLC35A3Q9Y2D2 325 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 ROS1P08922 2347 aa15.28■□□□□ 0.04
VPS9D1-203ENST00000563798 HEATR5AQ86XA9 2040 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 H7C1Q1 480 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 ADAP00813 363 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 OR12D1P0DN82 309 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 FKBP2P26885 142 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 APOBEC1P41238 236 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 CCR4P51679 360 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 TXNL4AP83876 142 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 FUT5Q11128 374 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 PDK3Q15120 406 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 TAB1Q15750 504 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 SSX8Q7RTT4 187 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 ATP6V1C2Q8NEY4 427 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 LILRB1Q8NHL6 650 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 XAGE5Q8WWM1 108 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 KISS1RQ969F8 398 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 ROPN1LQ96C74 230 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 PPP1R36Q96LQ0 422 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 CCDC115Q96NT0 180 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 CCDC106Q9BWC9 280 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 POTEKPQ9BYX7 375 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 QRSL1Q9H0R6 528 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 CXorf56Q9H5V9 222 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 EXOSC3Q9NQT5 275 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 BTNL2Q9UIR0 455 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 WDR45Q9Y484 360 aa15.27■□□□□ 0.04
VPS9D1-203ENST00000563798 ABCA2Q9BZC7 2435 aa15.27■□□□□ 0.03
VPS9D1-203ENST00000563798 IGKV3D-15A0A087WSY6 115 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 IGHV3-15A0A0B4J1V0 119 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 PRAMEF27A3QJZ7 478 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 E9PBE3 544 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 LY6G6DO95868 133 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 UBTFL6P0CB48 400 aaPredicted RBP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 BGNP21810 368 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 IL32P24001 234 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 CLK1P49759 484 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 DIO1P49895 249 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 CSNK2A1P68400 391 aaPredicted RBP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 RASGEF1BQ0VAM2 473 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 STX3Q13277 289 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 SYT14P1Q58G82 188 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 SPANXN4Q5MJ08 99 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms