RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CPPED1Q9BRF8 314 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-206ENST00000563672 RNF122Q9H9V4 155 aa18.21■□□□□ 0.51
CMTM3-206ENST00000563672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-206ENST00000563672 HEATR5AQ86XA9 2040 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 TNFSF11O14788 317 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 CXCL13O43927 109 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 TNFSF13O75888 250 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 ARAFP10398 606 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 SLC6A8P48029 635 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 ASCL1P50553 236 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 KLF10Q13118 480 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 SELENBP1Q13228 472 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 LIN52Q52LA3 116 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 MRPL2Q5T653 305 aaKnown RBP18.2■□□□□ 0.5
CMTM3-206ENST00000563672 HBMQ6B0K9 141 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 MEX3BQ6ZN04 569 aaKnown RBP18.2■□□□□ 0.5
CMTM3-206ENST00000563672 DHDDSQ86SQ9 333 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 VRK2Q86Y07 508 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 C10orf82Q8WW14 230 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 CGREF1Q99674 301 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 CORO2BQ9UQ03 480 aa18.2■□□□□ 0.5
CMTM3-206ENST00000563672 A0A1W2PNV4 684 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 CDHR4A6H8M9 788 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 GJE1A6NN92 205 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 EVPLLA8MZ36 301 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 FBP2O00757 339 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 AQP8O94778 261 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 PGM3O95394 542 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 THBS1P07996 1170 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 PRF1P14222 555 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 RYKP34925 604 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 SFTPDP35247 375 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 CARD18P57730 90 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 TMEM176BQ3YBM2 270 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-206ENST00000563672 PDSS1Q5T2R2 415 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 GCNT6Q5T4J0 391 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF836Q6ZNA1 936 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 PLEKHM3Q6ZWE6 761 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 DMRTC2Q8IXT2 367 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-206ENST00000563672 INTS1Q8N201 2190 aaKnown RBP18.19■□□□□ 0.5
CMTM3-206ENST00000563672 BBS10Q8TAM1 723 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 OSTF1Q92882 214 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 ANKRD27Q96NW4 1050 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 CCDC106Q9BWC9 280 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 TRIM8Q9BZR9 551 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 RLIMQ9NVW2 624 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 CHST2Q9Y4C5 530 aa18.19■□□□□ 0.5
CMTM3-206ENST00000563672 HCFC1P51610 2035 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ABCA12Q86UK0 2595 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 FAAHO00519 579 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 AP3D1O14617 1153 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 FCGR2AP12318 317 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ADSLP30566 484 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 KIR2DL2P43627 348 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 MERTKQ12866 999 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 NFYCQ13952 458 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 LARS2Q15031 903 aaKnown RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 GUSBP1Q15486 140 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ADRM1Q16186 407 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZSWIM7Q19AV6 140 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 RNF220Q5VTB9 566 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 MCEMP1Q8IX19 187 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF440Q8IYI8 595 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF295-AS1Q8N0V1 137 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ATP6V1C2Q8NEY4 427 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF563Q8TA94 476 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 RNASE6Q93091 150 aaKnown RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 PIGMQ9H3S5 423 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 TMEM38AQ9H6F2 299 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 PRDM4Q9UKN5 801 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 MCTS1Q9ULC4 181 aaKnown RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF232Q9UNY5 417 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 ZNF443Q9Y2A4 671 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-206ENST00000563672 IFT52Q9Y366 437 aa18.18■□□□□ 0.5
CMTM3-206ENST00000563672 MED12LQ86YW9 2145 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 CFAP73A6NFT4 308 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 C5orf58C9J3I9 102 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 ETS2P15036 469 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 APOBEC1P41238 236 aaKnown RBP18.17■□□□□ 0.5
CMTM3-206ENST00000563672 IDH2P48735 452 aaKnown RBP18.17■□□□□ 0.5
CMTM3-206ENST00000563672 CDK6Q00534 326 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 EPS8Q12929 822 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 REEP3Q6NUK4 255 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 C3orf33Q6P1S2 294 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 GRINAQ7Z429 371 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 CLIP4Q8N3C7 705 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 NFKBIDQ8NI38 313 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 STARD4Q96DR4 205 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 SPATA9Q9BWV2 254 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 RSPO3Q9BXY4 272 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-206ENST00000563672 PRRG4Q9BZD6 226 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 COQ10BQ9H8M1 238 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 TIGARQ9NQ88 270 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 SERINC1Q9NRX5 453 aa18.17■□□□□ 0.5
CMTM3-206ENST00000563672 FOXD3Q9UJU5 478 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-206ENST00000563672 EEF1E1-BLOC1S5C9J1V9 151 aa18.16■□□□□ 0.5
CMTM3-206ENST00000563672 EEF1E1O43324 174 aaKnown RBP18.16■□□□□ 0.5
CMTM3-206ENST00000563672 SYNGR4O95473 234 aa18.16■□□□□ 0.5
CMTM3-206ENST00000563672 PABPC4LP0CB38 370 aaKnown RBP18.16■□□□□ 0.5
CMTM3-206ENST00000563672 ACAA2P42765 397 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms