RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 RGNQ15493 299 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 EEF1A1P5Q5VTE0 462 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 DLEU7Q6UYE1 221 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 PLEKHM3Q6ZWE6 761 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 FAM214BQ7L5A3 538 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 CMIPQ8IY22 773 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 RNF128Q8TEB7 428 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 DYDC1Q8WWB3 177 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 SPDL1Q96EA4 605 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 RMND5AQ9H871 391 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 MTHFD2LQ9H903 347 aaPredicted RBP13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 ACER3Q9NUN7 267 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 PAQR5Q9NXK6 330 aaPredicted RBP13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 VAPAQ9P0L0 249 aa13.23□□□□□ -0.29
RPUSD1-204ENST00000563560 TEP1Q99973 2627 aaKnown RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 EEF1E1-BLOC1S5C9J1V9 151 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 AP3D1O14617 1153 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 EEF1E1O43324 174 aaKnown RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 FCGR2AP12318 317 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 SFTPDP35247 375 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 KIR2DL3P43628 341 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 DSTNP60981 165 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 SQLEQ14534 574 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 GPAT3Q53EU6 434 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 C22orf34Q6ZV56 151 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 LUZP2Q86TE4 346 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 ZZZ3Q8IYH5 903 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 FAM222BQ8WU58 562 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 OSTF1Q92882 214 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 RBM24Q9BX46 236 aaKnown RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 OPN3Q9H1Y3 402 aaPredicted RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 SLC24A3Q9HC58 644 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 BCL2L10Q9HD36 194 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 PLSCR4Q9NRQ2 329 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 CCDC167Q9P0B6 97 aa13.22□□□□□ -0.29
RPUSD1-204ENST00000563560 A0A1W2PP18 115 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 A0A1W2PPR1 153 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 CDHR4A6H8M9 788 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 CLIC1O00299 241 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 SIAH2O43255 324 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 PGCP20142 388 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 ACAA2P42765 397 aaKnown RBP13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 FAM27E3Q08E93 113 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 TESK1Q15569 626 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 ADRM1Q16186 407 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 RPS26P11Q5JNZ5 115 aaPredicted RBP13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 P4HA3Q7Z4N8 544 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 ADGRG3Q86Y34 549 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 TMEM19Q96HH6 336 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 ZNF559Q9BR84 538 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 A4GALTQ9NPC4 353 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 STOML1Q9UBI4 398 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 TESMINQ9Y4I5 508 aa13.21□□□□□ -0.29
RPUSD1-204ENST00000563560 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.3
RPUSD1-204ENST00000563560 A0A1W2PNR3 127 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 A6NNC1 897 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 SMAD9O15198 467 aaKnown RBP13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 NUDT14O95848 222 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 BCHEP06276 602 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 NR2F1P10589 423 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 EPXP11678 715 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 GPX2P18283 190 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 AGTR1P30556 359 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 CARD18P57730 90 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 RAC3P60763 192 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 STX1BP61266 288 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 EPS8Q12929 822 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 FADDQ13158 208 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 TMEM176BQ3YBM2 270 aaPredicted RBP13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 AGKQ53H12 422 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 C6orf10Q5SRN2 563 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 RNF220Q5VTB9 566 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 PRAMEF8Q5VWM4 474 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 PRAMEF7Q5VXH5 474 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 C3orf33Q6P1S2 294 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF836Q6ZNA1 936 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 CHMP1BQ7LBR1 199 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 COMTD1Q86VU5 262 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 DPP10Q8N608 796 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 TMCO5AQ8N6Q1 288 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 CNEP1R1Q8N9A8 125 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF610Q8N9Z0 462 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 OR6K3Q8NGY3 331 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
RPUSD1-204ENST00000563560 ROBO4Q8WZ75 1007 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms