RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ZNF175Q9Y473 711 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 SLC22A20A6NK97 555 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 EVPLLA8MZ36 301 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 H0YC42 278 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 ADAMDEC1O15204 470 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 TMIGD3P0DMS9 266 aaPredicted RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 NID1P14543 1247 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 GPX2P18283 190 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 ADSLP30566 484 aaPredicted RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 OPRM1P35372 400 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 SLC6A8P48029 635 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 TPD52P55327 224 aaPredicted RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 SNTB1Q13884 538 aaKnown RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 POMZP3Q6PJE2 187 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 ESPNLQ6ZVH7 1005 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 P4HA3Q7Z4N8 544 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 HMGN2P46Q86SG4 172 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 DHDDSQ86SQ9 333 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 TMEM234Q8WY98 164 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 ADGRG7Q96K78 797 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 PINK1Q9BXM7 581 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 BCL2L10Q9HD36 194 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 SAR1AQ9NR31 198 aa14.88□□□□□ -0.03
CDT1-202ENST00000562747 CCM2LQ9NUG4 571 aaPredicted RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.88□□□□□ -0.03
CDT1-202ENST00000562747 ACANP16112 2415 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 DOCK7Q96N67 2140 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 HEATR5AQ86XA9 2040 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 CLDN24A6NM45 220 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 GJE1A6NN92 205 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 EIF1AYO14602 144 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 BCAS1O75363 584 aaPredicted RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 TGM6O95932 706 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 THBS1P07996 1170 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 NUDT7P0C024 238 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 BMP5P22003 454 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 EEF1A1P68104 462 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 PLAURQ03405 335 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 SF3A3Q12874 501 aaKnown RBP eCLIP14.87□□□□□ -0.039e-7■■■■■ 44.5
CDT1-202ENST00000562747 KLF10Q13118 480 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 SELENBP1Q13228 472 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 MAPRE2Q15555 327 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 SGCBQ16585 318 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 ZSWIM7Q19AV6 140 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 CTU2Q2VPK5 515 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 LIN52Q52LA3 116 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 RUNDC3AQ59EK9 446 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 PDSS1Q5T2R2 415 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 GCNT6Q5T4J0 391 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 MRPL2Q5T653 305 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 EEF1A1P5Q5VTE0 462 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 OR2A2Q6IF42 318 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 LILRA2Q8N149 483 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 RELL2Q8NC24 303 aaPredicted RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 OR52P1PQ8NH57 321 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 OR2V1Q8NHB1 315 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 KLHL15Q96M94 604 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 CGREF1Q99674 301 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 FOXC2Q99958 501 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 CPPED1Q9BRF8 314 aaPredicted RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 SFXN3Q9BWM7 321 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 CACYBPQ9HB71 228 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 ACER3Q9NUN7 267 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 DNAJB12Q9NXW2 375 aaKnown RBP14.87□□□□□ -0.03
CDT1-202ENST00000562747 AKAP6Q13023 2319 aa14.87□□□□□ -0.03
CDT1-202ENST00000562747 NIPBLQ6KC79 2804 aaeCLIP14.87□□□□□ -0.03
CDT1-202ENST00000562747 MAP1AP78559 2803 aaPredicted RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 VPS13CQ709C8 3753 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 C5orf58C9J3I9 102 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 SLC22A2O15244 555 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 EFNA2O43921 213 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 CRHP06850 196 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 ARAFP10398 606 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 FCGR2AP12318 317 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 IL11P20809 199 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 EIF1AXP47813 144 aaKnown RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 SESN3P58005 492 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 NFYCQ13952 458 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 LARS2Q15031 903 aaKnown RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 PON3Q15166 354 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 COQ5Q5HYK3 327 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 RPS26P11Q5JNZ5 115 aaPredicted RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 RNF220Q5VTB9 566 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 PLXDC2Q6UX71 529 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 TGIF2LYQ8IUE0 185 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 ZNF440Q8IYI8 595 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 OR10D3Q8NH80 312 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 ZNF563Q8TA94 476 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 BBS10Q8TAM1 723 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 CNOT9Q92600 299 aaKnown RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 MAL2Q969L2 176 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 INTS12Q96CB8 462 aaKnown RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 ZNF845Q96IR2 970 aaPredicted RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 ANKRD27Q96NW4 1050 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 IKZF5Q9H5V7 419 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 TMEM38AQ9H6F2 299 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms