RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 WASHC1A8K0Z3 465 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 IDSB3KWA1 339 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 LSM1O15116 133 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 RRP8O43159 456 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 PRKRAO75569 313 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 KRT6AP02538 564 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 KRT6BP04259 564 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SERPIND1P05546 499 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 KLK3P07288 261 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 FHP07954 510 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CYC1P08574 325 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 COX6A1P12074 109 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 HSD3B1P14060 373 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 IL10P22301 178 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ANOS1P23352 680 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MMP11P24347 488 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 TTKP33981 857 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 XCR1P46094 333 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 GLIPR1P48060 266 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SLC1A6P48664 564 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 KRT6CP48668 564 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 GPR143P51810 404 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 PLA2G16P53816 162 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MTTPP55157 894 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 RAB38P57729 211 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 BTN3A2P78410 334 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 BTG2P78543 158 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 HMGCS1Q01581 520 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ASPHQ12797 758 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CDC20Q12834 499 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 COL28A1Q2UY09 1125 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 TUBB8Q3ZCM7 444 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SGO1Q5FBB7 561 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SH2D4BQ5SQS7 431 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MLIPQ5VWP3 458 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 C18orf63Q68DL7 685 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 NIPAL1Q6NVV3 410 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 TRIM40Q6P9F5 258 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 DGAT2L6Q6ZPD8 337 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 QSOX2Q6ZRP7 698 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 LANCL3Q6ZV70 420 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 COMMD6Q7Z4G1 85 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 NUDT13Q86X67 352 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CLYBLQ8N0X4 340 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 C1orf52Q8N6N3 182 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 GBP7Q8N8V2 638 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 NFAM1Q8NET5 270 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 OR11G2Q8NGC1 345 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 RAB3IL1Q8TBN0 382 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MGARPQ8TDB4 240 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 PPP4R1Q8TF05 950 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 TWIST2Q8WVJ9 160 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CKAP2Q8WWK9 683 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SELENOMQ8WWX9 145 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CCT6BQ92526 530 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ZNF75CPQ92670 426 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 TSLPQ969D9 159 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ATP6V1E2Q96A05 226 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ANKRD9Q96BM1 317 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 TM4SF18Q96CE8 201 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MAELQ96JY0 434 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 IMMP1LQ96LU5 166 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SERPINI1Q99574 410 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 VN1R1Q9GZP7 353 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MMP28Q9H239 520 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ELOVL6Q9H5J4 265 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 LYRM4Q9HD34 91 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 C14orf105Q9NVL8 296 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 IRAK4Q9NWZ3 460 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 TEX10Q9NXF1 929 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 TRPC4Q9UBN4 977 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 VPS29Q9UBQ0 182 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 GRHPRQ9UBQ7 328 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 ZNF282Q9UDV7 671 aaPredicted RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 GIMAP2Q9UG22 337 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 CES1P1Q9UKY3 287 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SNX6Q9UNH7 406 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 PTRH2Q9Y3E5 179 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 ATG4BQ9Y4P1 393 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 URB1O60287 2271 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 DSPP15924 2871 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 ACACAQ13085 2346 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 MGAQ8IWI9 3026 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 MED13Q9UHV7 2174 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 IGHV1-45A0A0A0MS14 117 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 IGHV3-20A0A0C4DH32 117 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 GOLGA6L10A6NI86 522 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 C9J4A7 227 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 SDHDO14521 159 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 DYNC1I1O14576 645 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ANKRD28O15084 1053 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 FGF17O60258 216 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 CTNSO60931 367 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ALOX12BO75342 701 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 CDC123O75794 336 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 CEACAM4O75871 244 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RSL1D1O76021 490 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 KDM4BO94953 1096 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms