RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HEPHL1Q6MZM0 1159 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 TMEM65Q6PI78 240 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 GALNT11Q8NCW6 608 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 DOK4Q8TEW6 326 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 THAP4Q8WY91 577 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ARSGQ96EG1 525 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 MS4A4EQ96PG1 132 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 FLVCR2Q9UPI3 526 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 CAMK2AQ9UQM7 478 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 RNF215Q9Y6U7 377 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 TRAV27A0A087WT01 109 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SC5DO75845 299 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 HRGP04196 525 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 LAMP2P13473 410 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 UGT2B7P16662 529 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 BMP8BP34820 402 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SOX9P48436 509 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 BLVRAP53004 296 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 HCCSP53701 268 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 RAG2P55895 527 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TSPAN5P62079 268 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 PLPP4Q5VZY2 271 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 DMKNQ6E0U4 476 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 LINGO2Q7L985 606 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 NLRC3Q7RTR2 1065 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 BMP8AQ7Z5Y6 402 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 OR4N5Q8IXE1 308 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF223Q9UK11 482 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TBC1D3BA6NDS4 549 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 PEX14O75381 377 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 AGR2O95994 175 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SERPINA3P01011 423 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 HTR2AP28223 471 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 ZP1P60852 638 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 DUSP5Q16690 384 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 ASPGQ86U10 573 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SLITRK4Q8IW52 837 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 VWCEQ96DN2 955 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 LRRC3BQ96PB8 259 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 C1QTNF7Q9BXJ2 289 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC35A3Q9Y2D2 325 aa12.94□□□□□ -0.34
VPS9D1-202ENST00000561976 NPIPA5A0A0B4J1W7 369 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 NPIPA7E9PJI5 369 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ARL6IP5O75915 188 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ADH1CP00326 375 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 NPIPA8P0DM63 369 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RRASP10301 218 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 IL9P15248 144 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF3P17036 446 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 EEF1A1P68104 462 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 IKZF1Q13422 519 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF234Q14588 700 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 MAPK14Q16539 360 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 DGLUCYQ7Z3D6 616 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 SLAIN1Q8ND83 568 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 OR2L8Q8NGY9 312 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 PEX11GQ96HA9 241 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 GSX2Q9BZM3 304 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 OR10A4Q9H209 315 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RPS6KB2Q9UBS0 482 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RCE1Q9Y256 329 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ABHD14A-ACY1A0A1B0GW23 586 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 A8MUA0 341 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 CDK2AP1O14519 115 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 GDI2P50395 445 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 DYRK1AQ13627 763 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 ARHGAP11BQ3KRB8 267 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 MRPL2Q5T653 305 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 TEX19Q8NA77 164 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 KCT2Q8NC54 265 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 LGALS14Q8TCE9 139 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 HAVCR2Q8TDQ0 301 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 GCDHQ92947 438 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 RADILQ96JH8 1075 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 DEFB118Q96PH6 123 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 SDF2Q99470 211 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 DDOQ99489 341 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 WDR26Q9H7D7 661 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms