RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 WRAP73Q9P2S5 460 aaPredicted RBP4.67□□□□□ -1.66
SMG1-204ENST00000561940 DPM3Q9P2X0 92 aa4.67□□□□□ -1.66
SMG1-204ENST00000561940 SAMD4AQ9UPU9 718 aaKnown RBP4.67□□□□□ -1.66
SMG1-204ENST00000561940 MRPS7Q9Y2R9 242 aaKnown RBP4.67□□□□□ -1.66
SMG1-204ENST00000561940 MAD1L1Q9Y6D9 718 aa4.67□□□□□ -1.66
SMG1-204ENST00000561940 FRMPD4Q14CM0 1322 aa4.67□□□□□ -1.66
SMG1-204ENST00000561940 CEP170BQ9Y4F5 1589 aaPredicted RBP4.66□□□□□ -1.66
SMG1-204ENST00000561940 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 PP2D1A8MPX8 630 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 OR7A17O14581 309 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 RIPPLY1Q0D2K3 151 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 FBXO30Q8TB52 745 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 AENQ8WTP8 325 aaKnown RBP4.66□□□□□ -1.66
SMG1-204ENST00000561940 IL1F10Q8WWZ1 152 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 CITED1Q99966 193 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 PPDPFQ9H3Y8 114 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 SLC17A5Q9NRA2 495 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 LCMT1Q9UIC8 334 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 PTBP2Q9UKA9 531 aaKnown RBP4.66□□□□□ -1.66
SMG1-204ENST00000561940 ANGPTL2Q9UKU9 493 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 MEMO1Q9Y316 297 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 MAB21L2Q9Y586 359 aa4.66□□□□□ -1.66
SMG1-204ENST00000561940 ANKRD30BQ9BXX2 1392 aa4.65□□□□□ -1.66
SMG1-204ENST00000561940 RGS12O14924 1447 aa4.65□□□□□ -1.66
SMG1-204ENST00000561940 ZNF705EA8MWA4 302 aaPredicted RBP4.65□□□□□ -1.67
SMG1-204ENST00000561940 PHOX2AO14813 284 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 ARPC3O15145 178 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 SERPINA2P20848 420 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 ADORA2BP29275 332 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 DHPSP49366 369 aaPredicted RBP4.65□□□□□ -1.67
SMG1-204ENST00000561940 AP3M2P53677 418 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 TP53I3Q53FA7 332 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 SLC25A30Q5SVS4 291 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 MARCH9Q86YJ5 346 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 C15orf54Q8N8G6 183 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 SYT14Q8NB59 555 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 OR1F12Q8NHA8 337 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 TRMT10AQ8TBZ6 339 aaKnown RBP4.65□□□□□ -1.67
SMG1-204ENST00000561940 MRAPQ8TCY5 172 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 RLN3Q8WXF3 142 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 BADQ92934 168 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 TGM7Q96PF1 710 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 DEFB126Q9BYW3 111 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 PDE10AQ9Y233 779 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 CDK13Q14004 1512 aaKnown RBP4.65□□□□□ -1.67
SMG1-204ENST00000561940 KIF16BQ96L93 1317 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 AGRNO00468 2067 aa4.65□□□□□ -1.67
SMG1-204ENST00000561940 RNF17Q9BXT8 1623 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 VSTM2BA6NLU5 285 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 RIPK2O43353 540 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 SNNO75324 88 aaPredicted RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 CYP2B6P20813 491 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 MMP11P24347 488 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 CD80P33681 288 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 P2RY1P47900 373 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 RPL29P47914 159 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 RPL32P62910 135 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 MRPS11P82912 194 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 OC90Q02509 493 aaPredicted RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 CSTF1Q05048 431 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 CENPPQ6IPU0 288 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 PMF1Q6P1K2 205 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 KDELC1Q6UW63 502 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 VITQ6UXI7 678 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 ZNF677Q86XU0 584 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 VSTM4Q8IW00 320 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 GPR137CQ8N3F9 429 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 KIR3DL3Q8N743 410 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 OR4D5Q8NGN0 318 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 PIGCQ92535 297 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 EMG1Q92979 244 aaKnown RBP4.64□□□□□ -1.67
SMG1-204ENST00000561940 PSKH2Q96QS6 385 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 MCHR1Q99705 422 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 PAXXQ9BUH6 204 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 IL36GQ9NZH8 169 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 PIPOXQ9P0Z9 390 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 PCSK1NQ9UHG2 260 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 LRP5O75197 1615 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 TNRQ92752 1358 aa4.64□□□□□ -1.67
SMG1-204ENST00000561940 LRRC9Q6ZRR7 1453 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 C15orf38-AP3S2A0A0A6YYH1 394 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 LRP5LA4QPB2 252 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 RHOBTB1O94844 696 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 LRATO95237 230 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 CCDC166P0CW27 439 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 CALB2P22676 271 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 MAP2K1Q02750 393 aaPredicted RBP4.63□□□□□ -1.67
SMG1-204ENST00000561940 ELAVL3Q14576 367 aaKnown RBP4.63□□□□□ -1.67
SMG1-204ENST00000561940 CXCL17Q6UXB2 119 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 SYT10Q6XYQ8 523 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 C16orf62Q7Z3J2 963 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 MOB3BQ86TA1 216 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 CLEC4FQ8N1N0 589 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 HAVCR1Q96D42 359 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 GON7Q9BXV9 100 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 MAGT1Q9H0U3 335 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 RHBGQ9H310 441 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 UFSP2Q9NUQ7 469 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 CLEC4AQ9UMR7 237 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 SCML2Q9UQR0 700 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms