RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SMNDC1O75940 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 ANP32DO95626 131 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 NR2F1P10589 423 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 ATP4BP51164 291 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 IRX1P78414 480 aaPredicted RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 ZNF239Q16600 458 aaKnown RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 C6orf10Q5SRN2 563 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 BLOC1S3Q6QNY0 202 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 CMIPQ8IY22 773 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 TMEM234Q8WY98 164 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 CPNE4Q96A23 557 aaPredicted RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 AURKBQ96GD4 344 aaPredicted RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 SRXN1Q9BYN0 137 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 PAIP1Q9H074 479 aaKnown RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 OPN3Q9H1Y3 402 aaPredicted RBP13.85□□□□□ -0.19
CCDC113-203ENST00000561517 SLC52A3Q9NQ40 469 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 PLSCR4Q9NRQ2 329 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 PCDHB14Q9Y5E9 798 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 ROS1P08922 2347 aa13.85□□□□□ -0.19
CCDC113-203ENST00000561517 CLDN24A6NM45 220 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 GOSR1O95249 250 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 ETFAP13804 333 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CD79BP40259 229 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CRATP43155 626 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 DSTNP60981 165 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 PPP4R4Q6NUP7 873 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 C3orf33Q6P1S2 294 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 SLC2A7Q6PXP3 512 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 HMGN2P46Q86SG4 172 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CDH24Q86UP0 819 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 ZNF610Q8N9Z0 462 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 OR6K3Q8NGY3 331 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 RNF128Q8TEB7 428 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CNOT9Q92600 299 aaKnown RBP13.84□□□□□ -0.19
CCDC113-203ENST00000561517 DACH2Q96NX9 599 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 GPATCH1Q9BRR8 931 aaKnown RBP13.84□□□□□ -0.19
CCDC113-203ENST00000561517 TIGARQ9NQ88 270 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 THUMPD1Q9NXG2 353 aaKnown RBP13.84□□□□□ -0.19
CCDC113-203ENST00000561517 DNAJB12Q9NXW2 375 aaKnown RBP13.84□□□□□ -0.19
CCDC113-203ENST00000561517 ELOVL5Q9NYP7 299 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CALML5Q9NZT1 146 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 P2RX2Q9UBL9 471 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 PROCRQ9UNN8 238 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 EMC9Q9Y3B6 208 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 DSPPQ9NZW4 1301 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 CSMD2Q7Z408 3487 aa13.84□□□□□ -0.19
CCDC113-203ENST00000561517 A0A096LPI6 279 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 EDF1O60869 148 aaKnown RBP13.83□□□□□ -0.2
CCDC113-203ENST00000561517 ADAM11O75078 769 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 PLGP00747 810 aaPredicted RBP13.83□□□□□ -0.2
CCDC113-203ENST00000561517 DBIP07108 87 aaKnown RBP13.83□□□□□ -0.2
CCDC113-203ENST00000561517 TFPTP0C1Z6 253 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 PABPC4LP0CB38 370 aaKnown RBP13.83□□□□□ -0.2
CCDC113-203ENST00000561517 BMP2P12643 396 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 CPOXP36551 454 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 CTBP2P56545 445 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 RAC3P60763 192 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 FAM27E3Q08E93 113 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 MERTKQ12866 999 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 LRIF1Q5T3J3 769 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 ARFGAP2Q8N6H7 521 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 ATP6V1C2Q8NEY4 427 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 SLC38A5Q8WUX1 472 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 WDR60Q8WVS4 1066 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 ROBO4Q8WZ75 1007 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 SLC39A3Q9BRY0 314 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 CCDC106Q9BWC9 280 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 POLDIP3Q9BY77 421 aaKnown RBP13.83□□□□□ -0.2
CCDC113-203ENST00000561517 SERINC1Q9NRX5 453 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 CCDC167Q9P0B6 97 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 CLEC4AQ9UMR7 237 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 MED13LQ71F56 2210 aa13.83□□□□□ -0.2
CCDC113-203ENST00000561517 A0A1W2PNR3 127 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 SH3D21A4FU49 640 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 CLIC1O00299 241 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 FAAHO00519 579 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 IL7RP16871 459 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 SLC7A1P30825 629 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 RYKP34925 604 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 APOBEC1P41238 236 aaKnown RBP13.82□□□□□ -0.2
CCDC113-203ENST00000561517 CRISP3P54108 245 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 FADDQ13158 208 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 GNA13Q14344 377 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 SQLEQ14534 574 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 RNPS1Q15287 305 aaKnown RBP13.82□□□□□ -0.2
CCDC113-203ENST00000561517 RGNQ15493 299 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 GRINAQ7Z429 371 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 MSRB3Q8IXL7 192 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 PEX5LQ8IYB4 626 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 ZNF563Q8TA94 476 aa13.82□□□□□ -0.2
CCDC113-203ENST00000561517 SLC25A43Q8WUT9 341 aaPredicted RBP13.82□□□□□ -0.2
CCDC113-203ENST00000561517 REXO5Q96IC2 774 aaKnown RBP13.82□□□□□ -0.2
CCDC113-203ENST00000561517 CLEC4MQ9H2X3 399 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms