RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 FRS3O43559 492 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 TPST1O60507 370 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 RCBTB2O95199 551 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 IL2RAP01589 272 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 DBIP07108 87 aaKnown RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 HNRNPCL4P0DMR1 293 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 TMIGD3P0DMS9 266 aaPredicted RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 IL7RP16871 459 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 BMP5P22003 454 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 EIF1AXP47813 144 aaKnown RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 GNGT1P63211 74 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HOXC5Q00444 222 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 PON3Q15166 354 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HSPB2Q16082 182 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 TMEM176BQ3YBM2 270 aaPredicted RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 GLIPR1L2Q4G1C9 344 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 RABL3Q5HYI8 236 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 NANOGP8Q6NSW7 305 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 PLEKHM3Q6ZWE6 761 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 GRAMD2AQ8IUY3 354 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 PEX5LQ8IYB4 626 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 OIT3Q8WWZ8 545 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 DNAJA3Q96EY1 480 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 NANOGQ9H9S0 305 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 EXOSC3Q9NQT5 275 aaKnown RBP12.47□□□□□ -0.41
TPM1-230ENST00000561266 CTPS2Q9NRF8 586 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 FBN2P35556 2912 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 FAM47E-STBD1D6RA91 191 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 SNX3O60493 162 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 TNFSF13O75888 250 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 PABPC4LP0CB38 370 aaKnown RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 IGFBP2P18065 325 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 CTSSP25774 331 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 ADH6P28332 368 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 EIF1P41567 113 aaKnown RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 IDH2P48735 452 aaKnown RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 CDK6Q00534 326 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 MERTKQ12866 999 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 EPS8Q12929 822 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 VWA1Q6PCB0 445 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 MTDHQ86UE4 582 aaKnown RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 ADGRG3Q86Y34 549 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 ZZZ3Q8IYH5 903 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 OR2V1Q8NHB1 315 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 PMM1Q92871 262 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 OSTF1Q92882 214 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 LRRC58Q96CX6 371 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 MRGPRX4Q96LA9 322 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 KLHL15Q96M94 604 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 RAD21L1Q9H4I0 556 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 PIF1Q9H611 641 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 TMEM38AQ9H6F2 299 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 KAT8Q9H7Z6 458 aaKnown RBP12.46□□□□□ -0.41
TPM1-230ENST00000561266 HHATLQ9HCP6 504 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 CALML5Q9NZT1 146 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
TPM1-230ENST00000561266 A0A1W2PNV4 684 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 GMNCA6NCL1 334 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 MRASO14807 208 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 PGCP20142 388 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 PPIBP23284 216 aaKnown RBP12.45□□□□□ -0.42
TPM1-230ENST00000561266 ELK4P28324 431 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 AQP1P29972 269 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 CRYBA2P53672 197 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 DMTNQ08495 405 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 SCARB2Q14108 478 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 GUSBP1Q15486 140 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 TRMT5Q32P41 509 aaKnown RBP12.45□□□□□ -0.42
TPM1-230ENST00000561266 PRAMEF8Q5VWM4 474 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 PRAMEF7Q5VXH5 474 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 HBMQ6B0K9 141 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 REEP3Q6NUK4 255 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
TPM1-230ENST00000561266 SERPINA11Q86U17 422 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 ZNF295-AS1Q8N0V1 137 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 ST8SIA1Q92185 356 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 RCN3Q96D15 328 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 TM9SF2Q99805 663 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 RNF122Q9H9V4 155 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 THUMPD1Q9NXG2 353 aaKnown RBP12.45□□□□□ -0.42
TPM1-230ENST00000561266 JKAMPQ9P055 326 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 OSGIN1Q9UJX0 560 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 CLEC4AQ9UMR7 237 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 CAPN7Q9Y6W3 813 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
TPM1-230ENST00000561266 IGHV3-15A0A0B4J1V0 119 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms