RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RAET1LQ5VY80 246 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 RTL6Q6ICC9 239 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 GRINAQ7Z429 371 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CD163Q86VB7 1156 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ARMC8Q8IUR7 673 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ULK2Q8IYT8 1036 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 LSMEM1Q8N8F7 131 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 FBXO27Q8NI29 283 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 C1orf21Q9H246 121 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ALG2Q9H553 416 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CALHM2Q9HA72 323 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CACYBPQ9HB71 228 aaKnown RBP8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 TNFRSF10DQ9UBN6 386 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CD300AQ9UGN4 299 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 TINAGQ9UJW2 476 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 USP22Q9UPT9 525 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 RPH3AQ9Y2J0 694 aaPredicted RBP8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 DOPEY2Q9Y3R5 2298 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TRGV8A0A0C4DH27 118 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CD8B2A6NJW9 211 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 B2RBV5 119 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 PYCARD-AS1I3L0S3 204 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CCL21O00585 134 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 AP3D1O14617 1153 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 LRRTM2O43300 516 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 GMFGO60234 142 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 SEMA7AO75326 666 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CYP7B1O75881 506 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 IFNA14P01570 189 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 UQCRBP14927 111 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CD247P20963 164 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 AQP1P29972 269 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TIMP3P35625 211 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC1A3P43003 542 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 HTR3AP46098 478 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CPA2P48052 419 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 STARP49675 285 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CLK1P49759 484 aaKnown RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 GSK3BP49841 420 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 RNF144AP50876 292 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF136P52737 540 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 SUCLG1P53597 346 aaKnown RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 FOXF1Q12946 379 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 SELENBP1Q13228 472 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 DUSP7Q16829 419 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 CTU2Q2VPK5 515 aaKnown RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 GLIPR1L2Q4G1C9 344 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 C1QL3Q5VWW1 255 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 NSUN5P2Q63ZY6 315 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TMEM211Q6ICI0 200 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 C16orf89Q6UX73 402 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 PLEKHM3Q6ZWE6 761 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 GGNQ86UU5 652 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 COMTD1Q86VU5 262 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 ARHGAP24Q8N264 748 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 FAM26EQ8N5C1 309 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TMCO5AQ8N6Q1 288 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TNIP2Q8NFZ5 429 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 GPR32P1Q8NGA4 272 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 TAMM41Q96BW9 452 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 ADGRG7Q96K78 797 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 RNF145Q96MT1 663 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 PIF1Q9H611 641 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 PAQR5Q9NXK6 330 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 ERRFI1Q9UJM3 462 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 FAM215AQ9Y5M1 114 aa8.68□□□□□ -1.02
RABGGTA-221ENST00000561055 MBD3L4A6NDZ8 208 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 MBD3L3A6NE82 208 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 MBD3L5A6NJ08 208 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 SHISA8B8ZZ34 492 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 H3BML4 177 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 FMO6PO60774 539 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 LDLRP01130 860 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 GKN3PP0CG01 181 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 GP1BBP13224 206 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 PRG2P13727 222 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 AGAP20933 346 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 CCR4P51679 360 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 PER3P56645 1201 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 SELENOWP63302 87 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC25A3Q00325 362 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 NRF1Q16656 503 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ACSF3Q4G176 576 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 DOPEY1Q5JWR5 2465 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 C1orf185Q5T7R7 199 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 WBP2NLQ6ICG8 309 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 C3orf33Q6P1S2 294 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 C6orf89Q6UWU4 347 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 B3GNT6Q6ZMB0 384 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ESPNLQ6ZVH7 1005 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 FJX1Q86VR8 437 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ADGRG3Q86Y34 549 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 LACC1Q8IV20 430 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 LILRA2Q8N149 483 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms