RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 IGHV1-2P23083 117 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 CLK3P49761 638 aaKnown RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 AQP5P55064 265 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 MANFP55145 182 aaKnown RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 FOXF1Q12946 379 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 RIPK1Q13546 671 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SNCBQ16143 134 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 CPTPQ5TA50 214 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 GTF2IRD2BQ6EKJ0 949 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 ZAR1Q86SH2 424 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 GTF2IRD2Q86UP8 949 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SAMD14Q8IZD0 417 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 LILRA2Q8N149 483 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 FBXL14Q8N1E6 418 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 OR2L13Q8N349 312 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 OR4C3Q8NH37 302 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SELENOMQ8WWX9 145 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 PIK3R3Q92569 461 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 CPNE4Q96A23 557 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SH3YL1Q96HL8 342 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 RADILQ96JH8 1075 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SORCS2Q96PQ0 1159 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 SORT1Q99523 831 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 PSD2Q9BQI7 771 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 PIMREGQ9BSJ6 248 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 BCO1Q9HAY6 547 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 ARL8BQ9NVJ2 186 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 MARCOQ9UEW3 520 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 HAO1Q9UJM8 370 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 IGHV3-15A0A0B4J1V0 119 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 MYO1GB0I1T2 1018 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 KLHL2O95198 593 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 PGM3O95394 542 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 TGFAP01135 160 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 PABPC4LP0CB38 370 aaKnown RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 KITP10721 976 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 TSPAN8P19075 237 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 GGT1P19440 569 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ENPP1P22413 925 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ME2P23368 584 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 CD40P25942 277 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 MAP3K8P41279 467 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 PRIM2P49643 509 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 COMPP49747 757 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 FABP6P51161 128 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ZNF41P51814 821 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 NCBP2P52298 156 aaKnown RBP eCLIP8.71□□□□□ -1.02
TPM1-225ENST00000560679 CD226Q15762 336 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ZNF544Q6NX49 715 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 SLC22A25Q6T423 547 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 TMEM108Q6UXF1 575 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ACTRT2Q8TDY3 377 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 C16orf78Q8WTQ4 265 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 SLC7A6OSQ96CW6 309 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 MUCL1Q96DR8 90 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ZMYND19Q96E35 227 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 NSL1Q96IY1 281 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 GATA5Q9BWX5 397 aaPredicted RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 EBPLQ9BY08 206 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 ACPTQ9BZG2 426 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 C20orf27Q9GZN8 174 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 NMUR2Q9GZQ4 415 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 GIMAP4Q9NUV9 329 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 DDX18Q9NVP1 670 aaKnown RBP8.71□□□□□ -1.02
TPM1-225ENST00000560679 OXSMQ9NWU1 459 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 VPS29Q9UBQ0 182 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 POU2F3Q9UKI9 436 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 SLC25A15Q9Y619 301 aa8.71□□□□□ -1.02
TPM1-225ENST00000560679 A0A1W2PR80 420 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 STX16-NPEPL1H3BU86 382 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 NDUFS8O00217 210 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 STX16O14662 325 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 RGS14O43566 566 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 NDUFB5O43674 189 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 RAD51DO75771 328 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 PRKD3O94806 890 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ATP6V1G2O95670 118 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 HSPA4LO95757 839 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 NGFRP08138 427 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 SBK3P0C264 359 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ZNF23P17027 643 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 CALB2P22676 271 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ELK4P28324 431 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 TIA1P31483 386 aaKnown RBP eCLIP8.7□□□□□ -1.02
TPM1-225ENST00000560679 IL2RGP31785 369 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ARRB2P32121 409 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 GABRA3P34903 492 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 MPIP34949 423 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 HTR6P50406 440 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 PDLIM4P50479 330 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ZNF83P51522 516 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 PSMD4P55036 377 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 MST1LQ2TV78 715 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 PDSS1Q5T2R2 415 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 LIPMQ5VYY2 423 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 MAVSQ7Z434 540 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms