RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LRIF1Q5T3J3 769 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 PLXDC2Q6UX71 529 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 DLEU7Q6UYE1 221 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 KRTCAP2Q8N6L1 136 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 CNEP1R1Q8N9A8 125 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 WFDC11Q8NEX6 87 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 OR2T12Q8NG77 320 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 OR4N2Q8NGD1 307 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 OR8J2Q8NGG1 315 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■■■□□ 18.8
SMAD3-214ENST00000560402 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 FAM120BQ96EK7 910 aaKnown RBP12.22□□□□□ -0.45
SMAD3-214ENST00000560402 C1GALT1C1Q96EU7 318 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 NSMCE2Q96MF7 247 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 LMF2Q9BU23 707 aaKnown RBP12.22□□□□□ -0.45
SMAD3-214ENST00000560402 DSN1Q9H410 356 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 LRCH1Q9Y2L9 728 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 DTNAQ9Y4J8 743 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PRSS51A0A1B0GVH4 220 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 OR2M5A3KFT3 312 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 FAM220BPB1ANY3 271 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 H3BNX3 289 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 UPK1AO00322 258 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 EMC8O43402 210 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 AKAP10O43572 662 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 NME6O75414 186 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 POU2F1P14859 743 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF17P17021 662 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 CRYGSP22914 178 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 TCEA1P23193 301 aaKnown RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 RABL3Q5HYI8 236 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 ERICH5Q6P6B1 374 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 VWA1Q6PCB0 445 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 IZUMO2Q6UXV1 221 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 CYP2R1Q6VVX0 501 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 CXorf67Q86X51 503 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 RIMKLAQ8IXN7 391 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 METTL25Q8N6Q8 603 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PIGTQ969N2 578 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 CCDC115Q96NT0 180 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 AMDHD1Q96NU7 426 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PANX1Q96RD7 426 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 MED18Q9BUE0 208 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 DUSP26Q9BV47 211 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 SPATA9Q9BWV2 254 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 TBL1XR1Q9BZK7 514 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 BHLHE41Q9C0J9 482 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 GLIPR2Q9H4G4 154 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 RAD21L1Q9H4I0 556 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 REEP4Q9H6H4 257 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 C8orf4Q9NR00 106 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 ARMC1Q9NVT9 282 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-214ENST00000560402 BTNL2Q9UIR0 455 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 AP4B1Q9Y6B7 739 aa12.21□□□□□ -0.45
SMAD3-214ENST00000560402 PCNX3Q9H6A9 2034 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 PDPK1O15530 556 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 SEC14L5O43304 696 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 INHBBP09529 407 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 FPR1P21462 350 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 CCKARP32238 428 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 UGT2B10P36537 528 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-214ENST00000560402 MTPNP58546 118 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 SIRPAP78324 504 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-214ENST00000560402 PRR5P85299 388 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 C17orf67Q0P5P2 114 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 GUSBP1Q15486 140 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 OR4F3Q6IEY1 312 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 DNAJC14Q6Y2X3 702 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-214ENST00000560402 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 ZFP28Q8NHY6 868 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 FIG4Q92562 907 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 ELP4Q96EB1 424 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 GSX1Q9H4S2 264 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-214ENST00000560402 MED11Q9P086 117 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 EGFL7Q9UHF1 273 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 ATP6V1HQ9UI12 483 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 AURKCQ9UQB9 309 aa12.2□□□□□ -0.46
SMAD3-214ENST00000560402 ELOVL7A1L3X0 281 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 C17orf51A8MQB3 221 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 H3BML4 177 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 C16orf97H3BN30 126 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 RNASET2O00584 256 aaKnown RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 SMPD2O60906 423 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 NGFRP08138 427 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 ATP6V1B2P21281 511 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms