RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FAM214BQ7L5A3 538 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 CDH24Q86UP0 819 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 RMND5AQ9H871 391 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 TPT1P8Q9HAU6 139 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 DNAJB12Q9NXW2 375 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 CCDC167Q9P0B6 97 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 SLAMF8Q9P0V8 285 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 LIPT1Q9Y234 373 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 PCDHB14Q9Y5E9 798 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 IGHV3-15A0A0B4J1V0 119 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 FAM221AA4D161 298 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 A6NNC1 897 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 NR5A2O00482 541 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 SS18L1O75177 396 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 SYNGR4O95473 234 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 NUDT7P0C024 238 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 TFPTP0C1Z6 253 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 EPXP11678 715 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 CAPN3P20807 821 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 RPS4Y1P22090 263 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 CCKARP32238 428 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ANXA11P50995 505 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 EEF1A1P68104 462 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 MERTKQ12866 999 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 DAZAP2Q15038 168 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ZNF239Q16600 458 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 RPS26P11Q5JNZ5 115 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 PAGE3Q5JUK9 113 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 EEF1A1P5Q5VTE0 462 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 PLEKHM3Q6ZWE6 761 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 MSRB3Q8IXL7 192 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ABHD3Q8WU67 409 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC38A5Q8WUX1 472 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ST8SIA1Q92185 356 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 LIME1Q9H400 295 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 MTHFD2LQ9H903 347 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 RASSF1Q9NS23 344 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ACER3Q9NUN7 267 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 RLIMQ9NVW2 624 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 PAQR5Q9NXK6 330 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC25A37Q9NYZ2 338 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 DCTN4Q9UJW0 460 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ITGB1BP2Q9UKP3 347 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 MCTS1Q9ULC4 181 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC35A3Q9Y2D2 325 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ITPR3Q14573 2671 aa10.41□□□□□ -0.74
RABGGTA-216ENST00000560243 ROS1P08922 2347 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 A0A096LPI6 279 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 SH3D21A4FU49 640 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 EDF1O60869 148 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 PLGP00747 810 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 BCHEP06276 602 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 CD8BP10966 210 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 PGCP20142 388 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 ENPP1P22413 925 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 CD79BP40259 229 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 PEX19P40855 299 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 DSTNP60981 165 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 TXNL4AP83876 142 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 SELENBP1Q13228 472 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 EXOC3L2Q2M3D2 409 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 AGKQ53H12 422 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 MRPL2Q5T653 305 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 VRK2Q86Y07 508 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 C10orf111Q8N326 155 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 ARFGAP2Q8N6H7 521 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 RNF128Q8TEB7 428 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 WDR60Q8WVS4 1066 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 OIT3Q8WWZ8 545 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 MAL2Q969L2 176 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 SPDL1Q96EA4 605 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 DNAJA3Q96EY1 480 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 GMPPAQ96IJ6 420 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 OR5B2Q96R09 309 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 CCDC106Q9BWC9 280 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 POLDIP3Q9BY77 421 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 CLEC4MQ9H2X3 399 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 NPHS2Q9NP85 383 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 CTPS2Q9NRF8 586 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 P2RX2Q9UBL9 471 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 PROCRQ9UNN8 238 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 EMC9Q9Y3B6 208 aa10.4□□□□□ -0.74
RABGGTA-216ENST00000560243 DSPPQ9NZW4 1301 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 GJE1A6NN92 205 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ENO4A6NNW6 628 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CLIC1O00299 241 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CCNA2P20248 432 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 AGTR1P30556 359 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 SLC7A1P30825 629 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 UGT2B10P36537 528 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 MAGEA8P43361 318 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 IDH2P48735 452 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CTBP2P56545 445 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 SQLEQ14534 574 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 POU4F3Q15319 338 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms