RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 LRP5LA4QPB2 252 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 KLLNB2CW77 178 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ZNF879B4DU55 563 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 NEDD8-MDP1E9PL57 170 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 HAS3O00219 553 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 INPP4BO15327 924 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 TNFSF12O43508 249 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 PRKAB2O43741 272 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SRPX2O60687 465 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 LRATO95237 230 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 POP4O95707 220 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 IGHG3P01860 377 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 RPLP0P05388 317 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 HBQ1P09105 142 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 HOXB7P09629 217 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 IMPDH1P20839 514 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 CHMLP26374 656 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 OXTRP30559 389 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SAA4P35542 130 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 RPL13AP40429 203 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 NAMPTP43490 491 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 BRCC3P46736 316 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 STK19P49842 368 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 DUSP3P51452 185 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 NOVA1P51513 510 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 CRYBA2P53672 197 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ATP1B3P54709 279 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 BDH1Q02338 343 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 RIPPLY1Q0D2K3 151 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 FCHO2Q0JRZ9 810 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 EIF2B1Q14232 305 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 GCKRQ14397 625 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 CD226Q15762 336 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MICBQ29980 383 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MS4A18Q3C1V0 323 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 DCST2Q5T1A1 773 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 PRR5LQ6MZQ0 368 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 PNCKQ6P2M8 343 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MOB2Q70IA6 237 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 UTS2BQ765I0 119 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 HSD11B1LQ7Z5J1 315 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 TSEN54Q7Z6J9 526 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 TRIM69Q86WT6 500 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 HPS6Q86YV9 775 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ZNF584Q8IVC4 421 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MICU2Q8IYU8 434 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 OR7G2Q8NG99 324 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 OR9Q2Q8NGE9 314 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 C11orf45Q8TAV5 145 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 AENQ8WTP8 325 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 BADQ92934 168 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 TADA1Q96BN2 335 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SGK3Q96BR1 496 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SDSLQ96GA7 329 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 PRRC1Q96M27 445 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ALKBH3Q96Q83 286 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 DUSP16Q9BY84 665 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ANKRD60Q9BZ19 345 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MRPL37Q9BZE1 423 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 ILKAPQ9H0C8 392 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 BLZF1Q9H2G9 400 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 HEXA-AS1Q9H8Q6 139 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 ANKRA2Q9H9E1 313 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 LZTFL1Q9NQ48 299 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SLC17A5Q9NRA2 495 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 CHRAC1Q9NRG0 131 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 MRPL22Q9NWU5 206 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 PDP1Q9P0J1 537 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 TBC1D24Q9ULP9 559 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 PACSIN2Q9UNF0 486 aaPredicted RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 CSDC2Q9Y534 153 aaKnown RBP2.94□□□□□ -1.94
SPG11-218ENST00000559754 ZNF318Q5VUA4 2279 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 INSRP06213 1382 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 GLTPD2A6NH11 291 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZNF724A8MTY0 619 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZNF701M0R085 212 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 PPIHO43447 177 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 CHMP2AO43633 222 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 RAMP1O60894 148 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 PDE5AO76074 875 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 OR2F2O95006 317 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 H6PDO95479 791 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 PLEKP08567 350 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 HOXD4P09016 255 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ATP1B2P14415 290 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 CCNB1P14635 433 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ANXA13P27216 316 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ID1P41134 155 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 BDKRB1P46663 353 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 RPS5P46782 204 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 CSNK1EP49674 416 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 PLP1P60201 277 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 YWHAGP61981 247 aaKnown RBP eCLIP2.93□□□□□ -1.94
SPG11-218ENST00000559754 OTUD4Q01804 1114 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZFP36L1Q07352 338 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 RGS1Q08116 209 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 GK3PQ14409 553 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 EMC2Q15006 297 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 RAB35Q15286 201 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms