RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 TSPEARQ8WU66 669 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 WNT2BQ93097 391 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 RAD21L1Q9H4I0 556 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 GPC6Q9Y625 555 aaPredicted RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 INTS1Q8N201 2190 aaKnown RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 A0A1W2PNR3 127 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 GMNCA6NCL1 334 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 SLC22A20A6NK97 555 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 C5orf58C9J3I9 102 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 AQP8O94778 261 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 PRG2P13727 222 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 NID1P14543 1247 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 PGCP20142 388 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 CTSSP25774 331 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 AQP1P29972 269 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 EEF1A1P68104 462 aaKnown RBP12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 HOXC5Q00444 222 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 CDK6Q00534 326 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 MERTKQ12866 999 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 SLC25A53Q5H9E4 307 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 HBMQ6B0K9 141 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 PLEKHM3Q6ZWE6 761 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 SPATA21Q7Z572 469 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 MTDHQ86UE4 582 aaKnown RBP12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 COMTD1Q86VU5 262 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 PTOV1Q86YD1 416 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 TREML1Q86YW5 311 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 METTL25Q8N6Q8 603 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 ROBO4Q8WZ75 1007 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 OSTF1Q92882 214 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 NANOGQ9H9S0 305 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 BCL2L10Q9HD36 194 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 CTPS2Q9NRF8 586 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 ACER3Q9NUN7 267 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 CALML5Q9NZT1 146 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 CLEC4AQ9UMR7 237 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 USP22Q9UPT9 525 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 ITPR3Q14573 2671 aa12.41□□□□□ -0.42
TSPAN3-205ENST00000558745 TMEM247A6NEH6 219 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 ADAMDEC1O15204 470 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 TPST1O60507 370 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 PABPC4LP0CB38 370 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 PRF1P14222 555 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 KLK2P20151 261 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 PPIBP23284 216 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 ADH6P28332 368 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 DLX5P56178 289 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 RPS3AP61247 264 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 SIRPAP78324 504 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 SCARB2Q14108 478 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 MMEL1Q495T6 779 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 RABL3Q5HYI8 236 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 VWA1Q6PCB0 445 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 OR10A6Q8NH74 314 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 MRGPRX4Q96LA9 322 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 TM9SF2Q99805 663 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 CCDC106Q9BWC9 280 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 THUMPD1Q9NXG2 353 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 HCFC1P51610 2035 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 CENPEQ02224 2701 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 LRBAP50851 2863 aa12.4□□□□□ -0.42
TSPAN3-205ENST00000558745 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CDHR4A6H8M9 788 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 FXYD1O00168 92 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 DVL2O14641 736 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 MRASO14807 208 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 GCM2O75603 506 aaPredicted RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 ME2P23368 584 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 GZMMP51124 257 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CARD18P57730 90 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 EPS8Q12929 822 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CYLC2Q14093 348 aaPredicted RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 GNA13Q14344 377 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 ESPNLQ6ZVH7 1005 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CPLX4Q7Z7G2 160 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 LUZP2Q86TE4 346 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 ADGRG3Q86Y34 549 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CMIPQ8IY22 773 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 BBS10Q8TAM1 723 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms