RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 HIPK4Q8NE63 616 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ATP6V1C2Q8NEY4 427 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 TNIP2Q8NFZ5 429 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 OR8J3Q8NGG0 315 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MBD3L2Q8NHZ7 208 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 TMEM234Q8WY98 164 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 PINK1Q9BXM7 581 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ARMC7Q9H6L4 198 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 PLEKHB1Q9UF11 243 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ANGPT4Q9Y264 503 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ARL2BPQ9Y2Y0 163 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MPDZO75970 2070 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CFAP73A6NFT4 308 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 HSPB2A8KAH6 182 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 AP3D1O14617 1153 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 AIM2O14862 343 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 EFNA2O43921 213 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ADAM11O75078 769 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 NTN1O95631 604 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 GP1BBP13224 206 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 AQP1P29972 269 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 EIF1AXP47813 144 aaKnown RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 IDH2P48735 452 aaKnown RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 MERTKQ12866 999 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 EPS8Q12929 822 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ART3Q13508 389 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 HSPB2Q16082 182 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 SGCBQ16585 318 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ZSWIM7Q19AV6 140 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 RABL3Q5HYI8 236 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 PDSS1Q5T2R2 415 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 PPP4R4Q6NUP7 873 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 POMZP3Q6PJE2 187 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ESPNLQ6ZVH7 1005 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 NET1Q7Z628 596 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 SERPINA11Q86U17 422 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 GGNQ86UU5 652 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ZZZ3Q8IYH5 903 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF440Q8IYI8 595 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 NAXEQ8NCW5 288 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 WNT2BQ93097 391 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-205ENST00000558428 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CCT8L2Q96SF2 557 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF607Q96SK3 696 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ECSITQ9BQ95 431 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 SPATA5L1Q9BVQ7 753 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 SPATA9Q9BWV2 254 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 PIF1Q9H611 641 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 ACER3Q9NUN7 267 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 CLCF1Q9UBD9 225 aa11.12□□□□□ -0.63
SMAD3-205ENST00000558428 A0A0J9YW62 118 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 GJE1A6NN92 205 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 TNFSF11O14788 317 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 TGM6O95932 706 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 UQCRBP14927 111 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 HTR1EP28566 365 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 SHC1P29353 583 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 PRKAR1BP31321 381 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 PCGF2P35227 344 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 PON3Q15166 354 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 CTU2Q2VPK5 515 aaKnown RBP11.11□□□□□ -0.63
SMAD3-205ENST00000558428 TMEM176BQ3YBM2 270 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-205ENST00000558428 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF550Q7Z398 422 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 OR2V1Q8NHB1 315 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 LILRB4Q8NHJ6 448 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 FIG4Q92562 907 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 ADGRG7Q96K78 797 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 CTPS2Q9NRF8 586 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 PAQR5Q9NXK6 330 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-205ENST00000558428 CHST2Q9Y4C5 530 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 KLF2Q9Y5W3 355 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-205ENST00000558428 PKDREJQ9NTG1 2253 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 HCFC1P51610 2035 aa11.11□□□□□ -0.63
SMAD3-205ENST00000558428 NKX2-6A6NCS4 301 aa11.1□□□□□ -0.63
SMAD3-205ENST00000558428 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
SMAD3-205ENST00000558428 FAAHO00519 579 aa11.1□□□□□ -0.63
SMAD3-205ENST00000558428 DVL2O14641 736 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms