RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 HIST2H2AA3Q6FI13 130 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CAPN13Q6MZZ7 669 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 C5orf46Q6UWT4 87 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 STXBP4Q6ZWJ1 553 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 C5orf24Q7Z6I8 188 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MARCH9Q86YJ5 346 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SLC13A5Q86YT5 568 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CDK20Q8IZL9 346 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 OR52H1Q8NGJ2 320 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 OR52J3Q8NH60 311 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SMAP2Q8WU79 429 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CACNG8Q8WXS5 425 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PNPLA2Q96AD5 504 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PPP1R36Q96LQ0 422 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 C9orf72Q96LT7 481 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF641Q96N77 438 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TSNARE1Q96NA8 513 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF317Q96PQ6 595 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PRRT1Q99946 306 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PKP2Q99959 881 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CLEC7AQ9BXN2 247 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NLNQ9BYT8 704 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RIBC2Q9H4K1 309 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 METTL8Q9H825 291 aaKnown RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RMND5AQ9H871 391 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NT5MQ9NPB1 228 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TIGARQ9NQ88 270 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 CENPMQ9NSP4 180 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NYAP2Q9P242 653 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 STOX2Q9P2F5 926 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ERVK-18Q9QC07 812 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NUP50Q9UKX7 468 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RNF24Q9Y225 148 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NCKAP1Q9Y2A7 1128 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TMED7Q9Y3B3 224 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF609O15014 1411 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PTCH1Q13635 1447 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ERCC6Q03468 1493 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ARAP1Q96P48 1450 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 LRRIQ1Q96JM4 1722 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 G3V2L1 256 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 H0YJX3 145 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 DFNA5O60443 496 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 SNAP91O60641 907 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 RAMP1O60894 148 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 NOS1APO75052 506 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 RHOBTB1O94844 696 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 VAMP5O95183 116 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GAS8O95995 478 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ASS1P00966 412 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 OAS1P00973 400 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PGK2P07205 417 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TRIM49P0CI25 452 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TRIM49CP0CI26 452 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GIMD1P0DJR0 217 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 UMPSP11172 480 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 CD1EP15812 388 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 MUC1P15941 1255 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF18P17022 549 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 UCP1P25874 307 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PSMB5P28074 263 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 OTX2P32243 289 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 SLC1A3P43003 542 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TNFRSF4P43489 277 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 CNN1P51911 297 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 NDST1P52848 882 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 RAB4BP61018 213 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 FKBP1BP68106 108 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 SLC7A9P82251 487 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 MRPS11P82912 194 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GLO1Q04760 184 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 CNTN1Q12860 1018 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PIGHQ14442 188 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 POU6F1Q14863 301 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PDK2Q15119 407 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 HKDC1Q2TB90 917 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 MPPE1Q53F39 396 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF311Q5JNZ3 666 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 FFAR4Q5NUL3 377 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 AGBL2Q5U5Z8 902 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM220Q6QAJ8 160 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 BLOC1S2Q6QNY1 142 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GDPGP1Q6ZNW5 385 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 MIER3Q7Z3K6 550 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 STX12Q86Y82 276 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 PHF13Q86YI8 300 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GPR65Q8IYL9 337 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 OFCC1Q8IZS5 231 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF843Q8N446 348 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 FNDC5Q8NAU1 212 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM178AQ8NBL3 297 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 BBS1Q8NFJ9 593 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 RNASE8Q8TDE3 154 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 CD300LFQ8TDQ1 290 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 SMPDL3AQ92484 453 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 TAF15Q92804 592 aaKnown RBP eCLIP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC51Q96ER9 411 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 MRPL48Q96GC5 212 aaKnown RBP1.41□□□□□ -2.18
HIF1A-212ENST00000557538 GPA33Q99795 319 aa1.41□□□□□ -2.18
HIF1A-212ENST00000557538 P2RY13Q9BPV8 354 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms