RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 CADM2Q8N3J6 435 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 GTPBP8Q8N3Z3 284 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-227ENST00000557269 OR52E4Q8NGH9 312 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 ZNF563Q8TA94 476 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 PHF10Q8WUB8 498 aaKnown RBP11.59□□□□□ -0.55
SHMT2-227ENST00000557269 SLC35B4Q969S0 331 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 ZBTB8AQ96BR9 441 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 PYURFQ96I23 114 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 AMBRA1Q9C0C7 1298 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 ADAM19Q9H013 955 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-227ENST00000557269 MUC13Q9H3R2 512 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 RPS6KA6Q9UK32 745 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 FREM3P0C091 2139 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 KALRNO60229 2985 aa11.58□□□□□ -0.55
SHMT2-227ENST00000557269 A0A1B0GWA3 101 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 H0YC42 278 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 SUSD5O60279 629 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 HCN1O60741 890 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 LYPD3O95274 346 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 GP1BBP13224 206 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 SHC1P29353 583 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 TACR3P29371 465 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 YAP1P46937 504 aaKnown RBP11.58□□□□□ -0.56
SHMT2-227ENST00000557269 TPD52P55327 224 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-227ENST00000557269 DLX5P56178 289 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 TLE1Q04724 770 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 MERTKQ12866 999 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 OR1Q1Q15612 314 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 C3AR1Q16581 482 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 IQCCQ4KMZ1 466 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 IFI44LQ53G44 452 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 POMZP3Q6PJE2 187 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 PLEKHM3Q6ZWE6 761 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 ADGRG3Q86Y34 549 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 LZICQ8WZA0 190 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 ST8SIA1Q92185 356 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 C7orf34Q96L11 122 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 MRGPRX4Q96LA9 322 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 SFXN2Q96NB2 322 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 MCHR1Q99705 422 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 UGT2B28Q9BY64 529 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 EXO5Q9H790 373 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 SAMD4AQ9UPU9 718 aaKnown RBP11.58□□□□□ -0.56
SHMT2-227ENST00000557269 CHD6Q8TD26 2715 aa11.58□□□□□ -0.56
SHMT2-227ENST00000557269 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CPSF4LA6NMK7 179 aaKnown RBP11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 NPIPA2E9PIF3 369 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 NPIPA3F8WFD2 350 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 H3BML4 177 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 J3KTA2 159 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 AQP7O14520 342 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 FFAR1O14842 300 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 PEPDP12955 493 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 EDN3P14138 238 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ZNF17P17021 662 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CCNA2P20248 432 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CHMP24386 653 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 SLC1A3P43003 542 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 LHX2P50458 406 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CLDN15P56746 228 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CRYZQ08257 329 aaKnown RBP11.57□□□□□ -0.56
SHMT2-227ENST00000557269 FLOT2Q14254 428 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 NHSL2Q5HYW2 709 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ENTPD8Q5MY95 495 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 VASNQ6EMK4 673 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 GFRALQ6UXV0 394 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 DEF8Q6ZN54 512 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 GRINAQ7Z429 371 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 GHDCQ8N2G8 530 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 TMEM234Q8WY98 164 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ABTB1Q969K4 478 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-227ENST00000557269 MIB2Q96AX9 1013 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 C3orf49Q96BT1 292 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 SEPHS2Q99611 448 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 TIMP4Q99727 224 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 ZNF559Q9BR84 538 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 TMEM185BQ9H7F4 350 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 TESQ9UGI8 421 aaKnown RBP11.57□□□□□ -0.56
SHMT2-227ENST00000557269 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 SLC9A8Q9Y2E8 581 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 SPTA1P02549 2419 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 CFAP46Q8IYW2 2715 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 MED12Q93074 2177 aa11.57□□□□□ -0.56
SHMT2-227ENST00000557269 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
SHMT2-227ENST00000557269 A0A0B4J2E0 115 aa11.56□□□□□ -0.56
SHMT2-227ENST00000557269 A0A1B0GX12 115 aa11.56□□□□□ -0.56
SHMT2-227ENST00000557269 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
SHMT2-227ENST00000557269 hCG_2039718K7EN88 272 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms