RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CLEC4FQ8N1N0 589 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 OR8J2Q8NGG1 315 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 MIPOL1Q8TD10 442 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 AENQ8WTP8 325 aaKnown RBP14.1□□□□□ -0.15
TUBB3-213ENST00000557262 TMEM234Q8WY98 164 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 ST8SIA1Q92185 356 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 OR5B2Q96R09 309 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 PSD2Q9BQI7 771 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 QRSL1Q9H0R6 528 aaKnown RBP14.1□□□□□ -0.15
TUBB3-213ENST00000557262 AKTIPQ9H8T0 292 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 ING1Q9UK53 422 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-213ENST00000557262 MKLN1Q9UL63 735 aa14.1□□□□□ -0.15
TUBB3-213ENST00000557262 USF3Q68DE3 2245 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 ZANQ9Y493 2812 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 PRSS51A0A1B0GVH4 220 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 ZNF724A8MTY0 619 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 CLOCKO15516 846 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 CYTIPO60759 359 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 AGR2O95994 175 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 GUSBP08236 651 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 PGCP20142 388 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 RPS4XP62701 263 aaKnown RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 HEPHL1Q6MZM0 1159 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 TMPPEQ6ZT21 453 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 EIF3MQ7L2H7 374 aaKnown RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 BHLHA15Q7RTS1 189 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 C16orf62Q7Z3J2 963 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 ZNF619Q8N2I2 560 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 VPS37AQ8NEZ2 397 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 OR4A15Q8NGL6 344 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 PIWIL2Q8TC59 973 aaKnown RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 XAGE5Q8WWM1 108 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 TRMT61AQ96FX7 289 aaKnown RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 SLC35G5Q96KT7 338 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 PPP1R36Q96LQ0 422 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 DPY30Q9C005 99 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 ZNF350Q9GZX5 532 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 OR51I1Q9H343 314 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 ACER3Q9NUN7 267 aa14.09□□□□□ -0.15
TUBB3-213ENST00000557262 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-213ENST00000557262 TLN2Q9Y4G6 2542 aa14.08□□□□□ -0.15
TUBB3-213ENST00000557262 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 RNF103-CHMP3A0A140T963 221 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 WDR91A4D1P6 747 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 C9JVG2 144 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 OVOL3O00110 214 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 SMAD9O15198 467 aaKnown RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 BIRC5O15392 142 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 SCN2BO60939 215 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 H6PDO95479 791 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 CPSF4O95639 269 aaKnown RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 SERPINE1P05121 402 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 DANCRP0C864 163 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 MYZAPP0CAP1 466 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 UBTFL6P0CB48 400 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 OR12D1P0DN82 309 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 UQCRC2P22695 453 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 PCSK6P29122 969 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 DIO1P49895 249 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ABCE1P61221 599 aaKnown RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 CSNK2A1P68400 391 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 MERTKQ12866 999 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 CHI3L2Q15782 390 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 PDCD2Q16342 344 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ANXA8L1Q5VT79 327 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 DNAJC14Q6Y2X3 702 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 OLIG3Q7RTU3 272 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF781Q8N8C0 355 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 SMAP2Q8WU79 429 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 OIT3Q8WWZ8 545 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF75CPQ92670 426 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF775Q96BV0 537 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-213ENST00000557262 PKNOX2Q96KN3 472 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 POTEKPQ9BYX7 375 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 POLE3Q9NRF9 147 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 PRSS50Q9UI38 385 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 RAP2CQ9Y3L5 183 aa14.08□□□□□ -0.16
TUBB3-213ENST00000557262 FREM1Q5H8C1 2179 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 JMJD1CQ15652 2540 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 CENPVL1A0A0U1RR11 272 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 DPRXA6NFQ7 191 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 SULT2B1O00204 365 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 SNUPNO95149 360 aaKnown RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 FESP07332 822 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 PGM1P36871 562 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 APOBEC1P41238 236 aaKnown RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 RPL14P50914 215 aaKnown RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 CASP9P55211 416 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 PHC1P78364 1004 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 PPP2R2BQ00005 443 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 TNK1Q13470 666 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 MAPK14Q16539 360 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF672Q499Z4 452 aaPredicted RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 SSX8Q7RTT4 187 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 MTDHQ86UE4 582 aaKnown RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF100Q8IYN0 542 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms