RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TIGARQ9NQ88 270 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SERINC1Q9NRX5 453 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 DNAJB12Q9NXW2 375 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF175Q9Y473 711 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 DOCK7Q96N67 2140 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 USP9XQ93008 2570 aaPredicted RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 A0A0J9YW62 118 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 CFAP73A6NFT4 308 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SYT5O00445 386 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 FAAHO00519 579 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 TNFSF11O14788 317 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 HNRNPRO43390 633 aaKnown RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 UQCRBP14927 111 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 IL11P20809 199 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 BMP5P22003 454 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 HTR3AP46098 478 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 IDH2P48735 452 aaKnown RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GYS2P54840 703 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GNGT1P63211 74 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 PLAURQ03405 335 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 TFF3Q07654 80 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RBBP4Q09028 425 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 MERTKQ12866 999 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 PON3Q15166 354 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ADRM1Q16186 407 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 TMEM176BQ3YBM2 270 aaPredicted RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RPS26P11Q5JNZ5 115 aaPredicted RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RNF220Q5VTB9 566 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 HBMQ6B0K9 141 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GTF2IRD2BQ6EKJ0 949 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 NANOGP8Q6NSW7 305 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 PLXDC2Q6UX71 529 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 PLEKHM3Q6ZWE6 761 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF550Q7Z398 422 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GRINAQ7Z429 371 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SERPINA11Q86U17 422 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GTF2IRD2Q86UP8 949 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 KRT73Q86Y46 540 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 C10orf111Q8N326 155 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 OR10D3Q8NH80 312 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 OR2V1Q8NHB1 315 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 NFKBIDQ8NI38 313 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RP9Q8TA86 221 aaKnown RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 INTS12Q96CB8 462 aaKnown RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 LRRC58Q96CX6 371 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 LRRC46Q96FV0 321 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF845Q96IR2 970 aaPredicted RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 KLHL15Q96M94 604 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF607Q96SK3 696 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SPOCK3Q9BQ16 436 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SPATA5L1Q9BVQ7 753 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 CCDC106Q9BWC9 280 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SFXN3Q9BWM7 321 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 SPATA9Q9BWV2 254 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 PRRG4Q9BZD6 226 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ENKD1Q9H0I2 346 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 TMEM185BQ9H7F4 350 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 KAT8Q9H7Z6 458 aaKnown RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 NANOGQ9H9S0 305 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RNF122Q9H9V4 155 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 RLIMQ9NVW2 624 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 GID8Q9NWU2 228 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF443Q9Y2A4 671 aaPredicted RBP9.6□□□□□ -0.87
LINC00239-201ENST00000556973 CAPN7Q9Y6W3 813 aa9.6□□□□□ -0.87
LINC00239-201ENST00000556973 MED12Q93074 2177 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 PRORSD1PA6NEY8 169 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 C19orf84I3L1E1 186 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 AP3D1O14617 1153 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MRASO14807 208 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 CXCL13O43927 109 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SNX3O60493 162 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ADAM11O75078 769 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SERPINB7O75635 380 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SYNGR4O95473 234 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FCGR2AP12318 317 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 COX6B1P14854 86 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 DRD4P21917 467 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 PRKAR1BP31321 381 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SFTPDP35247 375 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SLC1A3P43003 542 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MAP2K6P52564 334 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 AGFG1P52594 562 aaKnown RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MTPNP58546 118 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 EPS8Q12929 822 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FOXF2Q12947 444 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SCARB2Q14108 478 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 TRMT5Q32P41 509 aaKnown RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FBXL19-AS1Q494R0 122 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 REP15Q6BDI9 236 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 C3orf33Q6P1S2 294 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF836Q6ZNA1 936 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MTDHQ86UE4 582 aaKnown RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SLC30A8Q8IWU4 369 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 CLIP4Q8N3C7 705 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 C11orf65Q8NCR3 313 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 HIPK4Q8NE63 616 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms