RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ART3Q13508 389 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 SQLEQ14534 574 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 FCN2Q15485 313 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 RBBP7Q16576 425 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 SLC5A12Q1EHB4 618 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TMEM30BQ3MIR4 351 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TFDP3Q5H9I0 405 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 MFSD12Q6NUT3 480 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TMEM207Q6UWW9 146 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 CDHR3Q6ZTQ4 885 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 SNX20Q7Z614 316 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 KCNMB4Q86W47 210 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TBC1D21Q8IYX1 336 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 RCOR2Q8IZ40 523 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 RAB42Q8N4Z0 105 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TTC29Q8NA56 475 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-209ENST00000556827 THAP8Q8NA92 274 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 OR8K1Q8NGG5 319 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 OR52E1Q8NGJ3 308 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 OR4C3Q8NH37 302 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 CCDC107Q8WV48 283 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 LRR1Q96L50 414 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 RMDN2Q96LZ7 410 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 CCDC42Q96M95 316 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 OLFM3Q96PB7 478 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 URM1Q9BTM9 101 aaKnown RBP4.42□□□□□ -1.7
HIF1A-209ENST00000556827 FICDQ9BVA6 458 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TSSK1BQ9BXA7 367 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 HSD3B7Q9H2F3 369 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 XKR8Q9H6D3 395 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 WDR54Q9H977 334 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 OR6C2Q9NZP2 312 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 DHCR7Q9UBM7 475 aaKnown RBP4.42□□□□□ -1.7
HIF1A-209ENST00000556827 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 KCNK7Q9Y2U2 307 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 TDRKHQ9Y2W6 561 aaKnown RBP4.42□□□□□ -1.7
HIF1A-209ENST00000556827 ARL5AQ9Y689 179 aa4.42□□□□□ -1.7
HIF1A-209ENST00000556827 SDK2Q58EX2 2172 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 LRP4O75096 1905 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 TRAV17A0A0B4J275 112 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 TRGV8A0A0C4DH27 118 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 A0A0J9YY10 115 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 A0A1B0GX78 115 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 A0A1W2PN81 502 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 MACROD2A1Z1Q3 448 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PLOD3O60568 738 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 ACSL3O95573 720 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 AGTP01019 485 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 CAPN1P07384 714 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 STSP08842 583 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 OR56A5P0C7T3 313 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PVRP15151 417 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 UGT2B7P16662 529 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 HNRNPH3P31942 346 aaKnown RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 CA5AP35218 305 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PCGF2P35227 344 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PTGER4P35408 488 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 CHRNA7P36544 502 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 WNT5AP41221 380 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PRLHRP49683 370 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 RAB28P51157 221 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 SMSP52788 366 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 WASHC5Q12768 1159 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 DEFB110Q30KQ9 67 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 TCTE1Q5JU00 501 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 KDELC1Q6UW63 502 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 MFSD7Q6UXD7 560 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 ISLR2Q6UXK2 745 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 CDKL3Q8IVW4 592 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 ZNF567Q8N184 647 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 ZNF485Q8NCK3 441 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 PHLDA1Q8WV24 401 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 HPSE2Q8WWQ2 592 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 THOC1Q96FV9 657 aaKnown RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 RANBP9Q96S59 729 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 C19orf43Q9BQ61 176 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 EGLN1Q9GZT9 426 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 CHRNA10Q9GZZ6 450 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 OR52A5Q9H2C5 316 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 COG4Q9H9E3 785 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 TEKT2Q9UIF3 430 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 MRPS28Q9Y2Q9 187 aaKnown RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 MRPS2Q9Y399 296 aaKnown RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 KLF2Q9Y5W3 355 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-209ENST00000556827 NAV2Q8IVL1 2488 aa4.41□□□□□ -1.7
HIF1A-209ENST00000556827 SCN8AQ9UQD0 1980 aa4.4□□□□□ -1.7
HIF1A-209ENST00000556827 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 NSG1A0A0A6YYJ2 146 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ERI2A8K979 691 aaKnown RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 CCL21O00585 134 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PSMD3O43242 534 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PSTPIP1O43586 416 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SRPX2O60687 465 aaPredicted RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 AP2A1O95782 977 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 HPP00738 406 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 APOA4P06727 396 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 FAM157CP0CG43 387 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ICAM2P13598 275 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms