RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 ADAM11O75078 769 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 CGAP01215 116 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 ETFAP13804 333 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 MAGEA8P43361 318 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 ART1P52961 327 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 HBMQ6B0K9 141 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 ST8SIA1Q92185 356 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 PAQR5Q9NXK6 330 aaPredicted RBP20.27■□□□□ 0.84
PABPN1-207ENST00000556821 CCDC167Q9P0B6 97 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 PCDHB14Q9Y5E9 798 aa20.27■□□□□ 0.84
PABPN1-207ENST00000556821 DSPPQ9NZW4 1301 aa20.27■□□□□ 0.83
PABPN1-207ENST00000556821 NR2F1P10589 423 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 CPA2P48052 419 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 SESN3P58005 492 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 KCNJ10P78508 379 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 SELENBP1Q13228 472 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 PPP4R4Q6NUP7 873 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 KIF18BQ86Y91 864 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 MSRB3Q8IXL7 192 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 SRXN1Q9BYN0 137 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 SLC25A37Q9NYZ2 338 aa20.26■□□□□ 0.83
PABPN1-207ENST00000556821 NR5A2O00482 541 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 SMNDC1O75940 238 aaKnown RBP eCLIP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 ATP4BP51164 291 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 DSTNP60981 165 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 ZNF239Q16600 458 aaKnown RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 TMEM176BQ3YBM2 270 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 LRIF1Q5T3J3 769 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 ZNF474Q6S9Z5 364 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 CNOT9Q92600 299 aaKnown RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 OSTF1Q92882 214 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 SPDL1Q96EA4 605 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 OPN3Q9H1Y3 402 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 CXXC4Q9H2H0 198 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 ZNF385DQ9H6B1 395 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 EXOSC3Q9NQT5 275 aaKnown RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 SLAMF8Q9P0V8 285 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 P2RX2Q9UBL9 471 aa20.25■□□□□ 0.83
PABPN1-207ENST00000556821 MCTS1Q9ULC4 181 aaKnown RBP20.25■□□□□ 0.83
PABPN1-207ENST00000556821 A0A096LPI6 279 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 TUBAL3A6NHL2 446 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 CTAG2O75638 210 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 BCHEP06276 602 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 TFPTP0C1Z6 253 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 PGCP20142 388 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 CPOXP36551 454 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 CRATP43155 626 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 SQLEQ14534 574 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 PAGE3Q5JUK9 113 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 FAM214BQ7L5A3 538 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 TMEM200AQ86VY9 491 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 LSRQ86X29 649 aaPredicted RBP20.24■□□□□ 0.83
PABPN1-207ENST00000556821 ATP6V1C2Q8NEY4 427 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 LINC01560Q8TB33 94 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 FAM222BQ8WU58 562 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 SLC38A5Q8WUX1 472 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 WDR60Q8WVS4 1066 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 PRRG4Q9BZD6 226 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 MTHFD2LQ9H903 347 aaPredicted RBP20.24■□□□□ 0.83
PABPN1-207ENST00000556821 NPHS2Q9NP85 383 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 ACER3Q9NUN7 267 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 DNAJB12Q9NXW2 375 aaKnown RBP20.24■□□□□ 0.83
PABPN1-207ENST00000556821 DCTN4Q9UJW0 460 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 CLEC4AQ9UMR7 237 aa20.24■□□□□ 0.83
PABPN1-207ENST00000556821 HRNRQ86YZ3 2850 aaPredicted RBP20.24■□□□□ 0.83
PABPN1-207ENST00000556821 GJE1A6NN92 205 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 CLIC1O00299 241 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 AP3D1O14617 1153 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 SS18L1O75177 396 aaPredicted RBP20.23■□□□□ 0.83
PABPN1-207ENST00000556821 SYNGR4O95473 234 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 NUDT7P0C024 238 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 CD8BP10966 210 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 BMP2P12643 396 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 RYKP34925 604 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 CARD18P57730 90 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 IRX1P78414 480 aaPredicted RBP20.23■□□□□ 0.83
PABPN1-207ENST00000556821 RGNQ15493 299 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 AGKQ53H12 422 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 PDSS1Q5T2R2 415 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 MRPL2Q5T653 305 aaKnown RBP20.23■□□□□ 0.83
PABPN1-207ENST00000556821 PLEKHM3Q6ZWE6 761 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 CMIPQ8IY22 773 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 RNF128Q8TEB7 428 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 TMEM234Q8WY98 164 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 ROBO4Q8WZ75 1007 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 GMPPAQ96IJ6 420 aaPredicted RBP20.23■□□□□ 0.83
PABPN1-207ENST00000556821 TMEM45AQ9NWC5 275 aa20.23■□□□□ 0.83
PABPN1-207ENST00000556821 MAP1AP78559 2803 aaPredicted RBP20.23■□□□□ 0.83
PABPN1-207ENST00000556821 TRBV5-3A0A0A0MS03 114 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 A0A1W2PNR3 127 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 CCKARP32238 428 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 MERTKQ12866 999 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 RPS26P11Q5JNZ5 115 aaPredicted RBP20.22■□□□□ 0.83
PABPN1-207ENST00000556821 C3orf33Q6P1S2 294 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 TGIF2LYQ8IUE0 185 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 C10orf111Q8N326 155 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 ZNF610Q8N9Z0 462 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 ABHD3Q8WU67 409 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms