RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 KIAA0040Q15053 153 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 TOMM34Q15785 309 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 SLC25A53Q5H9E4 307 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 EXOSC6Q5RKV6 272 aaKnown RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 FAM166AQ6J272 317 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 RIBC1Q8N443 379 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 AENQ8WTP8 325 aaKnown RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 JADE3Q92613 823 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF75CPQ92670 426 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF300Q96RE9 604 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-221ENST00000556571 STACQ99469 402 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 PIGUQ9H490 435 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 REEP4Q9H6H4 257 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 GIN1Q9NXP7 522 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
ACTN1-221ENST00000556571 LOC100289279A0A1B0GTE1 492 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CIB4A0PJX0 185 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CCT8L1PA6NM43 557 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 NPIPB8E9PQR5 432 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 SMAD9O15198 467 aaKnown RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 OIP5O43482 229 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 AKAP10O43572 662 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 PRPH2P23942 346 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 SRSF2Q01130 221 aaKnown RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CHRNEQ04844 493 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 SQLEQ14534 574 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CCDC153Q494R4 210 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF385BQ569K4 471 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 FAM120AOSQ5T036 256 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 FBXW9Q5XUX1 488 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 OR52N5Q8NH56 324 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 OR5W2Q8NH69 310 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 MZB1Q8WU39 189 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CHMP6Q96FZ7 201 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CCT7Q99832 543 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 INPP5KQ9BT40 448 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 ROPN1BQ9BZX4 212 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 ROPN1Q9HAT0 212 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-221ENST00000556571 C1orf109Q9NX04 203 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 EMC3Q9P0I2 261 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 MID2Q9UJV3 735 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 CCL27Q9Y4X3 112 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 SLC25A15Q9Y619 301 aa10.46□□□□□ -0.73
ACTN1-221ENST00000556571 IGKV3D-15A0A087WSY6 115 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 NDUFS8O00217 210 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 SLC28A1O00337 649 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 EIF4E2O60573 245 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 RAD51DO75771 328 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 HMGN2P05204 90 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 PGRP06401 933 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 UROSP10746 265 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 DDX5P17844 614 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 CRHR1P34998 444 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 ATP12AP54707 1039 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 SPOCK1Q08629 439 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 PDE7AQ13946 482 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 LASP1Q14847 261 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 PDK3Q15120 406 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 QPRTQ15274 297 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 CFAP157Q5JU67 520 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 OR7E24Q6IFN5 339 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 C3orf33Q6P1S2 294 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 B3GLCTQ6Y288 498 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 C4orf33Q8N1A6 199 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 UBE2J2Q8N2K1 259 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 TOR1AIP2Q8NFQ8 470 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 CDS1Q92903 461 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 APH1AQ96BI3 265 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 MTERF3Q96E29 417 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 FAM120BQ96EK7 910 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 FKRPQ9H9S5 495 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 SERINC1Q9NRX5 453 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 ZCCHC3Q9NUD5 404 aaKnown RBP10.45□□□□□ -0.74
ACTN1-221ENST00000556571 DTNAQ9Y4J8 743 aa10.45□□□□□ -0.74
ACTN1-221ENST00000556571 NPIPA5A0A0B4J1W7 369 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 VWC2LB2RUY7 222 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 NPIPA7E9PJI5 369 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 M0R1B8 84 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 SULT2B1O00204 365 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF264O43296 627 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ERLIN1O75477 346 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 H6PDO95479 791 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 IGHV3-9P01782 118 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 NPIPA8P0DM63 369 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 CPA3P15088 417 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 SDC1P18827 310 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 APOBEC3AP31941 199 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 DIO1P49895 249 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 PDLIM4P50479 330 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 RNF144AP50876 292 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 CSNK2A1P68400 391 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 CBFBQ13951 182 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 GGTLC2Q14390 218 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms