RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.2
NEK9-209ENST00000556170 MEIOCA2RUB1 952 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ICMTO60725 284 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 DPM1O60762 260 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 IL1AP01583 271 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 CD79BP40259 229 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
NEK9-209ENST00000556170 BTG2P78543 158 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 BAK1Q16611 211 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 NKAIN2Q5VXU1 208 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.21
NEK9-209ENST00000556170 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 TOMM5Q8N4H5 51 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 SLC6A18Q96N87 628 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 CHIAQ9BZP6 476 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 DHCR7Q9UBM7 475 aaKnown RBP13.77□□□□□ -0.21
NEK9-209ENST00000556170 FNDC1Q4ZHG4 1894 aaPredicted RBP13.77□□□□□ -0.21
NEK9-209ENST00000556170 I3L521 148 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 F13BP05160 661 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 FPR3P25089 353 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ELOCQ15369 112 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 HYAL4Q2M3T9 481 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 PAMR1Q6UXH9 720 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 COMTD1Q86VU5 262 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 TMEM99Q8N816 258 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ZNF248Q8NDW4 579 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ASB15Q8WXK1 588 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 NECTIN4Q96NY8 510 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
NEK9-209ENST00000556170 C20orf141Q9NUB4 165 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 NOTCH4Q99466 2003 aa13.77□□□□□ -0.21
NEK9-209ENST00000556170 ARHGEF17Q96PE2 2063 aaPredicted RBP13.76□□□□□ -0.21
NEK9-209ENST00000556170 TVP23AA6NH52 213 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 FLRT2O43155 660 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
NEK9-209ENST00000556170 FOXK2Q01167 660 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 AGAP6Q5VW22 663 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 OTPQ5XKR4 325 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 TIGD4Q8IY51 512 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 AGAP4Q96P64 663 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 C17orf105B2RV13 164 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 RGS9O75916 674 aaPredicted RBP13.76□□□□□ -0.21
NEK9-209ENST00000556170 RLN1P04808 185 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 PEBP1P30086 187 aaKnown RBP13.76□□□□□ -0.21
NEK9-209ENST00000556170 TOMM20Q15388 145 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 NSDHLQ15738 373 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 ACSM3Q53FZ2 586 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 ZNF620Q6ZNG0 422 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 ASXL3Q9C0F0 2248 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 C5orf42Q9H799 3197 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 HEATR5BQ9P2D3 2071 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 CENPBD1B2RD01 187 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 H7C1C5 153 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
NEK9-209ENST00000556170 TGM1P22735 817 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
NEK9-209ENST00000556170 LCN6P62502 163 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 LEG1Q6P5S2 330 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 KIF18BQ86Y91 864 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 OR2A14Q96R47 310 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 SLC25A18Q9H1K4 315 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 POT1Q9NUX5 634 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
NEK9-209ENST00000556170 KIR2DS5A0A0G2JLQ3 304 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 A0A0G2JNG1 304 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 KIR2DS3K7RE56 304 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 MSL3P1P0C860 447 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 NID1P14543 1247 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 DRD5P21918 477 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 CTXN1P60606 82 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 KIR2DS5Q14953 304 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 C12orf73Q69YU5 71 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 BICRALQ6AI39 1079 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 XKRXQ6PP77 449 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 C14orf105Q9NVL8 296 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 GRHPRQ9UBQ7 328 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
NEK9-209ENST00000556170 ADAM18Q9Y3Q7 739 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 SLC22A7Q9Y694 548 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 IQCMA0A1B0GVH7 501 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 SEMA7AO75326 666 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 ARL6IP5O75915 188 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 NDUFB2O95178 105 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 CD3GP09693 182 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 GABRA5P31644 462 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 CASP3P42574 277 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 GAB4Q2WGN9 574 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 RFPL4BQ6ZWI9 263 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 MOSPD2Q8NHP6 518 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 NKD1Q969G9 470 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms