RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 COPZ1P61923 177 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 TRIP6Q15654 476 aaKnown RBP13.5□□□□□ -0.25
VPS33B-205ENST00000556096 PGGHGQ32M88 737 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 SYT14P1Q58G82 188 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 MRPL14Q6P1L8 145 aaKnown RBP13.5□□□□□ -0.25
VPS33B-205ENST00000556096 TMEM205Q6UW68 189 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 SLCO6A1Q86UG4 719 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 CYP4Z2PQ8N1L4 340 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 RNF31Q96EP0 1072 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 ZNF582Q96NG8 517 aaPredicted RBP13.5□□□□□ -0.25
VPS33B-205ENST00000556096 SPSB2Q99619 263 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 ENPP5Q9UJA9 477 aa13.5□□□□□ -0.25
VPS33B-205ENST00000556096 A0A087WUJ7 227 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 HTR3EA5X5Y0 456 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 GTPBP1O00178 669 aaKnown RBP13.49□□□□□ -0.25
VPS33B-205ENST00000556096 ZNF264O43296 627 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 CNOT3O75175 753 aaKnown RBP13.49□□□□□ -0.25
VPS33B-205ENST00000556096 ATE1O95260 518 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 LCKP06239 509 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
VPS33B-205ENST00000556096 PSMB9P28065 219 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 RNF4P78317 190 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 PLCXD2Q0VAA5 305 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 SKP2Q13309 424 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 CD226Q15762 336 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 NDUFAF6Q330K2 333 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 RNLSQ5VYX0 342 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 APOOLQ6UXV4 268 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 SLC43A2Q8N370 569 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 CADM2Q8N3J6 435 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 PHOSPHO1Q8TCT1 267 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 ZFAND2BQ8WV99 257 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 OMA1Q96E52 524 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 LRR1Q96L50 414 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 CTRCQ99895 268 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 NRSN2Q9GZP1 204 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 LAT2Q9GZY6 243 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 OR52D1Q9H346 318 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 WDR54Q9H977 334 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 LIN28AQ9H9Z2 209 aaKnown RBP13.49□□□□□ -0.25
VPS33B-205ENST00000556096 MRPS18AQ9NVS2 196 aaKnown RBP13.49□□□□□ -0.25
VPS33B-205ENST00000556096 ICAM5Q9UMF0 924 aa13.49□□□□□ -0.25
VPS33B-205ENST00000556096 EFCAB9A8MZ26 197 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
VPS33B-205ENST00000556096 SURF4O15260 269 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 ICOSLGO75144 302 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 PTP4A3O75365 173 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 RFPL3O75679 317 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 BMP7P18075 431 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 CCNA2P20248 432 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 ABCD3P28288 659 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 CCKBRP32239 447 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 FOXL2P58012 376 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 FXYD6P3P58550 94 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 TMEM44Q2T9K0 475 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 CLEC12AQ5QGZ9 265 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 WBP2NLQ6ICG8 309 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 SLC30A6Q6NXT4 461 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 HSDL2Q6YN16 418 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 SLC16A12Q6ZSM3 486 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
VPS33B-205ENST00000556096 PRR22Q8IZ63 422 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 OR52L1Q8NGH7 329 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 NUBPLQ8TB37 319 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 FANK1Q8TC84 345 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 ARSGQ96EG1 525 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 TMEM80Q96HE8 168 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 UBQLN3Q9H347 655 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 HHATLQ9HCP6 504 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 C19orf25Q9UFG5 118 aaPredicted RBP13.48□□□□□ -0.25
VPS33B-205ENST00000556096 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
VPS33B-205ENST00000556096 SIGLEC7Q9Y286 467 aa13.48□□□□□ -0.25
VPS33B-205ENST00000556096 IGHV3-20A0A0C4DH32 117 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 IRGMA1A4Y4 181 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 CDC14CA4D256 554 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 ALG1L2C9J202 215 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 KPNA4O00629 521 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PRODHO43272 600 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 MAN1A2O60476 641 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 HCN1O60741 890 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 GABARAPO95166 117 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PTNP21246 168 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 GRK5P34947 590 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PEX19P40855 299 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 SLC6A8P48029 635 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 KLHL22Q53GT1 634 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PAPD4Q6PIY7 484 aaKnown RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 SMARCD3Q6STE5 483 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 BCDIN3DQ7Z5W3 292 aaKnown RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 GATSQ8NAP1 163 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 OR8K3Q8NH51 312 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms