RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 WLSQ5T9L3 541 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 LCN8Q6JVE9 175 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ARSKQ6UWY0 536 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CHMP1BQ7LBR1 199 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CYP4Z1Q86W10 505 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CARM1Q86X55 608 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 C10orf67Q8IYJ2 551 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PM20D2Q8IYS1 436 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CADM2Q8N3J6 435 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 GTPBP8Q8N3Z3 284 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 GALNT11Q8NCW6 608 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ST6GALNAC3Q8NDV1 305 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 GPR32P1Q8NGA4 272 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 VANGL1Q8TAA9 524 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 SLC25A43Q8WUT9 341 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 DNAJA4Q8WW22 397 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 GEMIN6Q8WXD5 167 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 ABTB1Q969K4 478 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 PYURFQ96I23 114 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 RAB3IPQ96QF0 476 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 MCHR1Q99705 422 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ARHGDIGQ99819 225 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 UGT2B28Q9BY64 529 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CADM1Q9BY67 442 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 POLR2J2Q9GZM3 115 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 PCDHAC1Q9H158 963 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 POLR2J3Q9H1A7 115 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 SLC6A15Q9H2J7 730 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ACAD8Q9UKU7 415 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 AP4B1Q9Y6B7 739 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 MYO7BQ6PIF6 2116 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PCNX1Q96RV3 2341 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 NCKAP5O14513 1909 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 MPDZO75970 2070 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 A0A1B0GTH9 108 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 OR2M5A3KFT3 312 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 TRAPPC13A5PLN9 417 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 AQP12BA6NM10 295 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 FIGNL2A6NMB9 653 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 C17orf51A8MQB3 221 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 NPIPA2E9PIF3 369 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 NPIPA3F8WFD2 350 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 M0R3H8 397 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ETV2O00321 342 aaPredicted RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 PRRG2O14669 202 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 FRS3O43559 492 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 BCAS1O75363 584 aaPredicted RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 PRKD3O94806 890 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 PRB1P04280 392 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 HOXD4P09016 255 aaPredicted RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 CELA3AP09093 270 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 PNMTP11086 282 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 UMPSP11172 480 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 BMP7P18075 431 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 CXCR1P25024 350 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 TACR3P29371 465 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 PTGER4P35408 488 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CLK1P49759 484 aaKnown RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 TDGF1P3P51864 188 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ZNF136P52737 540 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CRYBA2P53672 197 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 DLX5P56178 289 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 RPS3AP61247 264 aaKnown RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 RAC1P63000 192 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 TLE1Q04724 770 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CHRNB3Q05901 458 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 FOXF1Q12946 379 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SELENBP1Q13228 472 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 BCL2A1Q16548 175 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 TMEM44Q2T9K0 475 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 GLIPR1L2Q4G1C9 344 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 FAM98BQ52LJ0 330 aaKnown RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 NHSL2Q5HYW2 709 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SWT1Q5T5J6 900 aaKnown RBP6.91□□□□□ -1.3
TDP1-214ENST00000556063 C1orf146Q5VVC0 180 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 VASNQ6EMK4 673 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ZNF613Q6PF04 617 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 DEF8Q6ZN54 512 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 PLEKHM3Q6ZWE6 761 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ASRGL1Q7L266 308 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SPPL2CQ8IUH8 684 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 AQP12AQ8IXF9 295 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 LSMEM1Q8N8F7 131 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 OR6T1Q8NGN1 323 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 RNF217Q8TC41 542 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SLC47A1Q96FL8 570 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CLPTM1LQ96KA5 538 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 C12orf10Q9HB07 376 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CHRNA9Q9UGM1 479 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SLC7A8Q9UHI5 535 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 SLC6A5Q9Y345 797 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 CHST2Q9Y4C5 530 aa6.91□□□□□ -1.3
TDP1-214ENST00000556063 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms