RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DCST1Q5T197 706 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 OR5M10Q6IEU7 315 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 C3orf33Q6P1S2 294 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 TTC33Q6PID6 262 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 CBLN3Q6UW01 205 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 APOOLQ6UXV4 268 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ZNF730Q6ZMV8 503 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 ASB18Q6ZVZ8 466 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 GALNTL5Q7Z4T8 443 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 AMER2Q8N7J2 671 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 OR2M3Q8NG83 312 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 SLC25A43Q8WUT9 341 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-220ENST00000555634 DNAJC9Q8WXX5 260 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 LRTOMTQ8WZ04 291 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 SLCO4A1Q96BD0 722 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 C1GALT1C1Q96EU7 318 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 SCMH1Q96GD3 660 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 C7orf34Q96L11 122 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 HS6ST2Q96MM7 605 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 PIGQQ9BRB3 760 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 DSN1Q9H410 356 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 CTPS2Q9NRF8 586 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 MED11Q9P086 117 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 RIMS3Q9UJD0 308 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 VDAC3Q9Y277 283 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 B3GNT3Q9Y2A9 372 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 TMEM5Q9Y2B1 443 aa10.2□□□□□ -0.78
SHMT2-220ENST00000555634 NCKAP5O14513 1909 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 A0A0B4J2E0 115 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 A0A1B0GWA3 101 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 A0A1B0GX12 115 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 HTR3EA5X5Y0 456 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 C2orf72A6NCS6 295 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 G3V2T6 193 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 H3BNX3 289 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 LINC01387J3KSC0 135 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TPST2O60704 377 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TRIM3O75382 744 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TRAPPC6AO75865 159 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 DIRAS1O95057 198 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 RASAL1O95294 804 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 CRYABP02511 175 aaKnown RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 HK1P19367 917 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ADH6P28332 368 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 PTGDSP41222 190 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 APOBEC1P41238 236 aaKnown RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ST13P50502 369 aaKnown RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 UGT2B15P54855 530 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 HOXC5Q00444 222 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 SELENBP1Q13228 472 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 PIN1Q13526 163 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 NPTX1Q15818 432 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 POMZP3Q6PJE2 187 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 LACC1Q8IV20 430 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 SULF2Q8IWU5 870 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 FAM109AQ8N4B1 249 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 FADS6Q8N9I5 356 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 OR52J3Q8NH60 311 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 OR5K1Q8NHB7 308 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 PIGXQ8TBF5 258 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 DDIT4LQ96D03 193 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 NRBF2Q96F24 287 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ALPK1Q96QP1 1244 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 SLC19A3Q9BZV2 496 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 SEMA6AQ9H2E6 1030 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 EXO5Q9H790 373 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 NMNAT1Q9HAN9 279 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ACER3Q9NUN7 267 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 MED17Q9NVC6 651 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 QPCTLQ9NXS2 382 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TUBA8Q9NY65 449 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-220ENST00000555634 RHCGQ9UBD6 479 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ACAD8Q9UKU7 415 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 ZMIZ1Q9ULJ6 1067 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TP53TG5Q9Y2B4 290 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 MED31Q9Y3C7 131 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 U3KQV3 271 aa10.19□□□□□ -0.78
SHMT2-220ENST00000555634 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 C7orf72A4D263 438 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 ARRDC5A6NEK1 342 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 SAC3D1A6NKF1 404 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 J3KTA2 159 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 OR10H3O60404 316 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 EPPINO95925 133 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 PRG2P13727 222 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 HTR2AP28223 471 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 ACAA2P42765 397 aaKnown RBP10.18□□□□□ -0.78
SHMT2-220ENST00000555634 ALDH6A1Q02252 535 aaKnown RBP10.18□□□□□ -0.78
SHMT2-220ENST00000555634 FOXF1Q12946 379 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 PLPPR5Q32ZL2 321 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 GLYR1Q49A26 553 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-220ENST00000555634 SHQ1Q6PI26 577 aaKnown RBP10.18□□□□□ -0.78
SHMT2-220ENST00000555634 FAM180AQ6UWF9 173 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 GDF7Q7Z4P5 450 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 AMIGO2Q86SJ2 522 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 COMTD1Q86VU5 262 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 RBM45Q8IUH3 476 aaKnown RBP10.18□□□□□ -0.78
SHMT2-220ENST00000555634 ATG16L2Q8NAA4 619 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 GPR119Q8TDV5 335 aa10.18□□□□□ -0.78
SHMT2-220ENST00000555634 GIPC3Q8TF64 312 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms