RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CBLCQ9ULV8 474 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 POFUT2Q9Y2G5 429 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 LYVE1Q9Y5Y7 322 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 A0A1B0GVG6 124 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 TP53I11O14683 189 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RGS10O43665 173 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 NME2P1O60361 137 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 PPM1BO75688 479 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 DIRAS1O95057 198 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FBXO45P0C2W1 286 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 NME2P22392 152 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 ACVR2AP27037 513 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RRM2P31350 389 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 DNASE1L1P49184 302 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 TMED10P49755 219 aaKnown RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 MEOX1P50221 254 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 HMGA2P52926 109 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 DSTNP60981 165 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RPP38P78345 283 aaKnown RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 EMX1Q04741 257 aaPredicted RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 INPP5JQ15735 1006 aaPredicted RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FGD3Q5JSP0 725 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 COX20Q5RI15 118 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SYT6Q5T7P8 510 aaPredicted RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SLC22A10Q63ZE4 541 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SAXO2Q658L1 398 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 LYPD8Q6UX82 237 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 OLIG3Q7RTU3 272 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 PRSS48Q7RTY5 328 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RNF130Q86XS8 419 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SULF2Q8IWU5 870 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SLC15A4Q8N697 577 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 BCORP1Q8N888 145 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 CDRT4Q8N9R6 151 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 OR4C15Q8NGM1 316 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 NFKBIDQ8NI38 313 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 CNIH3Q8TBE1 160 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SPPL2AQ8TCT8 520 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SFXN5Q8TD22 340 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FAR1Q8WVX9 515 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FCGR1BQ92637 280 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RORBQ92753 470 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 RAB8BQ92930 207 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 TAMM41Q96BW9 452 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 GIMAP5Q96F15 307 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SLC35A4Q96G79 324 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FUNDC2Q9BWH2 189 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 ACTRT3Q9BYD9 372 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 NAA50Q9GZZ1 169 aaKnown RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 OR51I1Q9H343 314 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 METTL7AQ9H8H3 244 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 A4GALTQ9NPC4 353 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 SACM1LQ9NTJ5 587 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 DEPPQ9NTK1 212 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 PAK1IP1Q9NWT1 392 aaPredicted RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 GIN1Q9NXP7 522 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 KLRF1Q9NZS2 232 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 FLRT3Q9NZU0 649 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 WARS2Q9UGM6 360 aaKnown RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 NTNG1Q9Y2I2 539 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 KLF13Q9Y2Y9 288 aaPredicted RBP9.02□□□□□ -0.96
PSEN1-213ENST00000555386 KCNE3Q9Y6H6 103 aa9.02□□□□□ -0.96
PSEN1-213ENST00000555386 ESPL1Q14674 2120 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SH3PXD2BA1X283 911 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 FAM166BA8MTA8 275 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 B8ZZF3 427 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PTGES3LE9PB15 166 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SLC22A1O15245 554 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GMFGO60234 142 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PDE9AO76083 593 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GABARAPO95166 117 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 IGKV1D-16P01601 117 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 INHBBP09529 407 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 OR12D1P0DN82 309 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 RHCEP18577 417 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GGT2P36268 569 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GP2P55259 537 aaKnown RBP9.02□□□□□ -0.97
PSEN1-213ENST00000555386 IL1RL1Q01638 556 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PLGLB1Q02325 96 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 KCNC4Q03721 635 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 C19orf57Q0VDD7 668 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NPTX1Q15818 432 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NTRK2Q16620 822 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 DECR1Q16698 335 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 MICAQ29983 383 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 REEP3Q6NUK4 255 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 CDC73Q6P1J9 531 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 BHLHB9Q6PI77 547 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 FAM180AQ6UWF9 173 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 TSEN54Q7Z6J9 526 aaKnown RBP9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GPALPP1Q8IXQ4 340 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 DEPDC4Q8N2C3 294 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PARP8Q8N3A8 854 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 FAM98AQ8NCA5 519 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms