RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MEDAGQ5VYS4 303 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SLC27A4Q6P1M0 643 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 SLC34A3Q8N130 599 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 LIPHQ8WWY8 451 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 RNF31Q96EP0 1072 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 HS6ST2Q96MM7 605 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PHOX2BQ99453 314 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 BCL7BQ9BQE9 202 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 TAPBPLQ9BX59 468 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 JAM3Q9BX67 310 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SPRY4Q9C004 299 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 MCCC2Q9HCC0 563 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 MED17Q9NVC6 651 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 CLCA3PQ9Y6N3 262 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 IDSB3KWA1 339 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 H3BN98 237 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 WISP1O95388 367 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 PTHP01270 115 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 ABCD3P28288 659 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 GRK5P34947 590 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 GRK6P43250 576 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 PNLIPRP2P54317 469 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 RPS4XP62701 263 aaKnown RBP8.15□□□□□ -1.1
TDP1-210ENST00000554976 RNF4P78317 190 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 ZNF91Q05481 1191 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 CDCP2Q5VXM1 449 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 PLAG1Q6DJT9 500 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 TCEANCQ8N8B7 351 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 ZNF485Q8NCK3 441 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 OSTF1Q92882 214 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 HGDQ93099 445 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 MYDGFQ969H8 173 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 CCNL2Q96S94 520 aaPredicted RBP8.15□□□□□ -1.1
TDP1-210ENST00000554976 GTPBP2Q9BX10 602 aaKnown RBP8.15□□□□□ -1.1
TDP1-210ENST00000554976 DPH1Q9BZG8 443 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 CACYBPQ9HB71 228 aaKnown RBP8.15□□□□□ -1.1
TDP1-210ENST00000554976 CLN6Q9NWW5 311 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 TAS2R16Q9NYV7 291 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 GOLGA4Q13439 2230 aaKnown RBP8.15□□□□□ -1.1
TDP1-210ENST00000554976 PCNX3Q9H6A9 2034 aa8.15□□□□□ -1.1
TDP1-210ENST00000554976 IGHV3-20A0A0C4DH32 117 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 EFCAB10A6NFE3 127 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 ALG1L2C9J202 215 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 FLRT2O43155 660 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 TRMUO75648 421 aaKnown RBP8.15□□□□□ -1.11
TDP1-210ENST00000554976 UMODP07911 640 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 POU1F1P28069 291 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 ZNF117Q03924 483 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 ST3GAL4Q11206 333 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 NDUFA5Q16718 116 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 FAM209AQ5JX71 171 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 ULK3Q6PHR2 472 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 CBLN3Q6UW01 205 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 THSD4Q6ZMP0 1018 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 SHISA6Q6ZSJ9 500 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 P3H2Q8IVL5 708 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 ZNF440Q8IYI8 595 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 OR8K3Q8NH51 312 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 NUBPLQ8TB37 319 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 FCGR1BQ92637 280 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 IL4I1Q96RQ9 567 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 CTRCQ99895 268 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 LAT2Q9GZY6 243 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 IRF2BPLQ9H1B7 796 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 HHATLQ9HCP6 504 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 AMBNQ9NP70 447 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 FGF20Q9NP95 211 aaPredicted RBP8.15□□□□□ -1.11
TDP1-210ENST00000554976 IMPAD1Q9NX62 359 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 DNAJC27Q9NZQ0 273 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 NOX1Q9Y5S8 564 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 SNX5Q9Y5X3 404 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 GON4LQ3T8J9 2241 aa8.15□□□□□ -1.11
TDP1-210ENST00000554976 C17orf51A8MQB3 221 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 B4E171 279 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 KLF7O75840 302 aaPredicted RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 LDOC1O95751 146 aaPredicted RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 CSTAP01040 98 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 UBL4AP11441 157 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 CCL4P13236 92 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 PTNP21246 168 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 SLC2A5P22732 501 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 LIPAP38571 399 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TSPAN7P41732 249 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 EGR4Q05215 589 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 NCF4Q15080 339 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 NUP54Q7Z3B4 507 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 LNX2Q8N448 690 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TEX47Q8TBZ9 253 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 GRHL3Q8TE85 626 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 RAB2BQ8WUD1 216 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 KISS1RQ969F8 398 aaPredicted RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 BPIFA2Q96DR5 249 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 OMA1Q96E52 524 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 OR52D1Q9H346 318 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 UBQLN3Q9H347 655 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms