RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RCE1Q9Y256 329 aa14.56□□□□□ -0.08
SYNE3-203ENST00000554873 CARHSP1Q9Y2V2 147 aaKnown RBP14.56□□□□□ -0.08
SYNE3-203ENST00000554873 PRRC2BQ5JSZ5 2229 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 HELZP42694 1942 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 OR6C74A6NCV1 312 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 NEDD8-MDP1E9PL57 170 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 RFXAPO00287 272 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 DEFA6Q01524 100 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 MED27Q6P2C8 311 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 CD300LDQ6UXZ3 194 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 TMPRSS11BQ86T26 416 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 APOBEC4Q8WW27 367 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 PPCDCQ96CD2 204 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 WDR77Q9BQA1 342 aaPredicted RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 PBX4Q9BYU1 374 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 DHCR7Q9UBM7 475 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 A0A0G2JK05 382 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 EIF4E2O60573 245 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 NME6O75414 186 aaPredicted RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 PRKRAO75569 313 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 TGFB1P01137 390 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 RPL3P39023 403 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 RNF144AP50876 292 aaPredicted RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 ARFIP1P53367 373 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 EPHB3P54753 998 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 ARSIQ5FYB1 569 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 C10orf91Q5T1B1 145 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 MTFR2Q6P444 385 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 KLHDC8AQ8IYD2 350 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 HORMAD2Q8N7B1 307 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 TMEM159Q96B96 161 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 AUNIPQ9H7T9 357 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 RNF122Q9H9V4 155 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 MRPL15Q9P015 296 aaKnown RBP14.55□□□□□ -0.08
SYNE3-203ENST00000554873 SH2B3Q9UQQ2 575 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
SYNE3-203ENST00000554873 KDM4EB2RXH2 506 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 HYAL3O43820 417 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 STX11O75558 287 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PAK4O96013 591 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 CATP04040 527 aaKnown RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 CKMP06732 381 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 ARAFP10398 606 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PDHA2P29803 388 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 STAT5AP42229 794 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 KRT33BQ14525 404 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 TCTN3Q6NUS6 607 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PRSS45Q7RTY3 260 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 NAA40Q86UY6 237 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 CFAP206Q8IYR0 622 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 OR4F15Q8NGB8 312 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 C16orf78Q8WTQ4 265 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 MRPS31Q92665 395 aaKnown RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 RIOK2Q9BVS4 552 aaKnown RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 GULP1Q9UBP9 304 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF629Q9UEG4 869 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 OR2W5A6NFC9 320 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 NOS3P29474 1203 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 GCGRP47871 477 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 SMIM11AP58511 58 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 TAS2R50P59544 299 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 BDH1Q02338 343 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PDE7AQ13946 482 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF322Q6U7Q0 402 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-203ENST00000554873 Q6ZVU0 165 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 RASGEF1AQ8N9B8 481 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 NR4A3Q92570 626 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 OR1F2PQ96R84 312 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 GINS4Q9BRT9 223 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF649Q9BS31 505 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PPP1R14DQ9NXH3 145 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 GPR52Q9Y2T5 361 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 THSD7BQ9C0I4 1608 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PDE4DIPQ5VU43 2346 aa14.54□□□□□ -0.08
SYNE3-203ENST00000554873 PHYHO14832 338 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 GPR37O15354 613 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 ICOSLGO75144 302 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 ANXA7P20073 488 aaKnown RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 EIF2S3P41091 472 aaKnown RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SLC6A11P48066 632 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 AP3S2P59780 193 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 BLOC1S1P78537 153 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SLC25A35Q3KQZ1 300 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 H3F3CQ6NXT2 135 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 FAM180BQ6P0A1 224 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SLC7A13Q8TCU3 470 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SLC25A28Q96A46 364 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 PLEKHA6Q9Y2H5 1048 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 TRAPPC13A5PLN9 417 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 C1orf196B1AJZ1 125 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 F5H5P2 479 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF197O14709 1029 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 EPHX1P07099 455 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SOAT1P35610 550 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 CDH11P55287 796 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 H2BFSP57053 126 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms