RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 THTPAQ9BU02 230 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 LMF2Q9BU23 707 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 THUMPD3Q9BV44 507 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ITPAQ9BY32 194 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CADM1Q9BY67 442 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ACTRT3Q9BYD9 372 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 WWTR1Q9GZV5 400 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 MS4A7Q9GZW8 240 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 NXF5Q9H1B4 397 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 LRMDAQ9H2I8 198 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR51I1Q9H343 314 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 LIN28AQ9H9Z2 209 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 MMP25Q9NPA2 562 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 SPAG4Q9NPE6 437 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 NDE1Q9NXR1 346 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ADA2Q9NZK5 511 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 COPS7AQ9UBW8 275 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PRODH2Q9UF12 536 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 FAF1Q9UNN5 650 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 EML6Q6ZMW3 1958 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 LOC400499M0QZD8 3231 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CPAMD8Q8IZJ3 1885 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GXYLT2A0PJZ3 443 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 MBD3L4A6NDZ8 208 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 MBD3L3A6NE82 208 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 TTC36A6NLP5 189 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 FAM220BPB1ANY3 271 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 TAF4O00268 1085 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 HMGN4O00479 90 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ASNA1O43681 348 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF354AO60765 605 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PDE5AO76074 875 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ZFAND5O76080 213 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SORBS2O94875 1100 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 NKX2-2O95096 273 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 NADKO95544 446 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SERPINA7P05543 415 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ALOX5P09917 674 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 DRD5P21918 477 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GABRA3P34903 492 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PGM1P36871 562 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 CRATP43155 626 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PPICP45877 212 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GSK3BP49841 420 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 KHKP50053 298 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 CLCN2P51788 898 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 EEFSECP57772 596 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 DSTNP60981 165 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 TXNL4AP83876 142 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 LIPEQ05469 1076 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 FUT5Q11128 374 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 CDC20Q12834 499 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 FADDQ13158 208 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 CEACAM7Q14002 265 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 NNATQ16517 81 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 DNAL1Q4LDG9 190 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PIGGQ5H8A4 983 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SAMD4BQ5PRF9 694 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 DCAF10Q5QP82 559 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GCNT6Q5T4J0 391 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 FCRLBQ6BAA4 426 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 HEPHL1Q6MZM0 1159 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ANGPTL8Q6UXH0 198 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 HSDL2Q6YN16 418 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SLC29A4Q7RTT9 530 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SERPINA11Q86U17 422 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 LIX1LQ8IVB5 337 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SLC44A2Q8IWA5 706 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 RNF148Q8N7C7 305 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 OR4N2Q8NGD1 307 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 OR8K3Q8NH51 312 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 NUBPLQ8TB37 319 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 FAM110BQ8TC76 370 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ADAMTS15Q8TE58 950 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 XAGE5Q8WWM1 108 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 THAP4Q8WY91 577 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PIK3R3Q92569 461 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SLC9A6Q92581 669 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 CDS1Q92903 461 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 MAL2Q969L2 176 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 VPS50Q96JG6 964 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GAL3ST4Q96RP7 486 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 STACQ99469 402 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ECSITQ9BQ95 431 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 AMBRA1Q9C0C7 1298 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PIGUQ9H490 435 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 RAD21L1Q9H4I0 556 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 A4GALTQ9NPC4 353 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 DUSP22Q9NRW4 184 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 GIN1Q9NXP7 522 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PRPF19Q9UMS4 504 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 AP3M1Q9Y2T2 418 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 L3MBTL1Q9Y468 752 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.77□□□□□ -1.49
SCFD1-212ENST00000554486 ACACBO00763 2458 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 LAMA5O15230 3695 aa5.77□□□□□ -1.49
SCFD1-212ENST00000554486 PCNX3Q9H6A9 2034 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 C2orf92A0A1B0GVN3 265 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 FRG2CA6NGY1 282 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 DUXAA6NLW8 204 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms