RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CHRNEQ04844 493 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 SNTB1Q13884 538 aaKnown RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 QPRTQ15274 297 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 MAPK14Q16539 360 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 SYPL1Q16563 259 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF239Q16600 458 aaKnown RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 TIGD2Q4W5G0 525 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 GPAT3Q53EU6 434 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 COX20Q5RI15 118 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 HBMQ6B0K9 141 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 C3orf33Q6P1S2 294 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 OLIG3Q7RTU3 272 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 BTLAQ7Z6A9 289 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 LUZP2Q86TE4 346 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 TMEM200AQ86VY9 491 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 TMCO5AQ8N6Q1 288 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ANKFN1Q8N957 763 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 CNEP1R1Q8N9A8 125 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 OR9I1Q8NGQ6 314 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 OR6K3Q8NGY3 331 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 RNF128Q8TEB7 428 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 DYDC1Q8WWB3 177 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 CKAP2Q8WWK9 683 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 TMEM234Q8WY98 164 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 GTF2H4Q92759 462 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 CPNE4Q96A23 557 aaPredicted RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF524Q96C55 264 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 DACH2Q96NX9 599 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 EBF4Q9BQW3 602 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 THUMPD3Q9BV44 507 aaKnown RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 SLC38A1Q9H2H9 487 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 COQ10BQ9H8M1 238 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 GP6Q9HCN6 339 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ACER3Q9NUN7 267 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 THUMPD1Q9NXG2 353 aaKnown RBP6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ELOVL5Q9NYP7 299 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 CALML5Q9NZT1 146 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 P2RX2Q9UBL9 471 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 PRDM4Q9UKN5 801 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 DSPPQ9NZW4 1301 aa6.74□□□□□ -1.33
LINC00640-201ENST00000554409 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 ANKHD1Q8IWZ3 2542 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 FAAHO00519 579 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SMNDC1O75940 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 ANP32DO95626 131 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 OPN1LWP04000 364 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 DBIP07108 87 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PABPC4LP0CB38 370 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 UBTFL6P0CB48 400 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SHC1P29353 583 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 CPOXP36551 454 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 CD79BP40259 229 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 APOBEC1P41238 236 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SLC6A8P48029 635 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 CCR4P51679 360 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 AQP5P55064 265 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 CARD18P57730 90 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SIRPAP78324 504 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 FADDQ13158 208 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 RNPS1Q15287 305 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 MAPK11Q15759 364 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 LRIF1Q5T3J3 769 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF474Q6S9Z5 364 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 DNAJC14Q6Y2X3 702 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PLEKHM3Q6ZWE6 761 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 CDH24Q86UP0 819 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 LURAP1LQ8IV03 231 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 FUNDC1Q8IVP5 155 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 RFWD2Q8NHY2 731 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PNPT1Q8TCS8 783 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SLC25A43Q8WUT9 341 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 OSTF1Q92882 214 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 VPS33AQ96AX1 596 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 ZG16BQ96DA0 208 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SIKE1Q9BRV8 207 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SLC39A3Q9BRY0 314 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 POLDIP3Q9BY77 421 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SRXN1Q9BYN0 137 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PRRG4Q9BZD6 226 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PAIP1Q9H074 479 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 OPN3Q9H1Y3 402 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 RAD21L1Q9H4I0 556 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 TMEM185BQ9H7F4 350 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 MTHFD2LQ9H903 347 aaPredicted RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 TPT1P8Q9HAU6 139 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 SLC52A3Q9NQ40 469 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 TIGARQ9NQ88 270 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PLSCR4Q9NRQ2 329 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 RASSF1Q9NS23 344 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
LINC00640-201ENST00000554409 PROCRQ9UNN8 238 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 EMC9Q9Y3B6 208 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 TESMINQ9Y4I5 508 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 GMEB1Q9Y692 573 aa6.73□□□□□ -1.33
LINC00640-201ENST00000554409 A0A096LPI6 279 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SH3D21A4FU49 640 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms