RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 C3orf33Q6P1S2 294 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 TNFAIP8L2Q6P589 184 aaPredicted RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 PAMR1Q6UXH9 720 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF619Q8N2I2 560 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 RNF128Q8TEB7 428 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 XAGE5Q8WWM1 108 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 TMEM234Q8WY98 164 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF75CPQ92670 426 aaPredicted RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 PMM1Q92871 262 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 OSTF1Q92882 214 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 MBD6Q96DN6 1003 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 C7orf26Q96N11 449 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 OR52E6Q96RD3 313 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 FOXC2Q99958 501 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 OPN3Q9H1Y3 402 aaPredicted RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 CXXC4Q9H2H0 198 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 TMEM185BQ9H7F4 350 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 FANCFQ9NPI8 374 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 SDR39U1Q9NRG7 319 aaPredicted RBP9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 FREM1Q5H8C1 2179 aa9.31□□□□□ -0.92
PTCD2P1-201ENST00000554393 CENPVL1A0A0U1RR11 272 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 C16orf97H3BN30 126 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 HMGN4O00479 90 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 RFXANKO14593 260 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 CASKO14936 926 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 EFNA2O43921 213 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 TGDSO95455 350 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 KRT75O95678 551 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 UBTFL6P0CB48 400 aaPredicted RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZCCHC18P0CG32 403 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 PGCP20142 388 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 SHC1P29353 583 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 CCKARP32238 428 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 SFTPDP35247 375 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 PGM1P36871 562 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 MRPL19P49406 292 aaKnown RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 CCR4P51679 360 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ART1P52961 327 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 IST1P53990 364 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 NME5P56597 212 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 TOMM34Q15785 309 aaPredicted RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 MAPK14Q16539 360 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 NDUFAF6Q330K2 333 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 SLC9B1Q4ZJI4 515 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 FBXW10Q5XX13 1052 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 PPP4R4Q6NUP7 873 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 MAVSQ7Z434 540 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 RNF130Q86XS8 419 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 CMIPQ8IY22 773 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 SLC43A2Q8N370 569 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF610Q8N9Z0 462 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 SLC25A43Q8WUT9 341 aaPredicted RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 NRGNQ92686 78 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 RAB8BQ92930 207 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 REXO5Q96IC2 774 aaKnown RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ATP6V1G3Q96LB4 118 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 TACO1Q9BSH4 297 aaKnown RBP9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 INPP5KQ9BT40 448 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 OR10A4Q9H209 315 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 COQ10BQ9H8M1 238 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ACER3Q9NUN7 267 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF226Q9NYT6 803 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 PRDM4Q9UKN5 801 aa9.3□□□□□ -0.92
PTCD2P1-201ENST00000554393 NAV3Q8IVL0 2385 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 RAI1Q7Z5J4 1906 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 UQCRHLA0A096LP55 91 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 PRAMEF27A3QJZ7 478 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 C9JVG2 144 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 UBDO15205 165 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 H6PDO95479 791 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 OPN1LWP04000 364 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 RAF1P04049 648 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 PPP3CBP16298 524 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 HOXB4P17483 251 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 CRYGSP22914 178 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 DNASE1P24855 282 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 FKBP2P26885 142 aaKnown RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 AGTR1P30556 359 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SLC7A1P30825 629 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 CDKN2CP42773 168 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 KCNJ5P48544 419 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 CASP9P55211 416 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SESN3P58005 492 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 RAC3P60763 192 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 GNA13Q14344 377 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 TMEM176BQ3YBM2 270 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 TIGD2Q4W5G0 525 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 EPGNQ6UW88 154 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 LRRC74BQ6ZQY2 392 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF621Q6ZSS3 439 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 STK32CQ86UX6 486 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 MIER2Q8N344 545 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms