RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PSMA4P25789 261 aaKnown RBP11.08□□□□□ -0.64
SHMT2-209ENST00000553949 HTR2AP28223 471 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 ADH6P28332 368 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 SLC1A3P43003 542 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 DLX5P56178 289 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 KCNC4Q03721 635 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 FLOT2Q14254 428 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 SLC25A53Q5H9E4 307 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 AAGABQ6PD74 315 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 ENPP6Q6UWR7 440 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 GRINAQ7Z429 371 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 CADM2Q8N3J6 435 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 GTPBP8Q8N3Z3 284 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-209ENST00000553949 LSMEM1Q8N8F7 131 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 POC1BQ8TC44 478 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 GEMIN6Q8WXD5 167 aaKnown RBP11.08□□□□□ -0.64
SHMT2-209ENST00000553949 SFXN2Q96NB2 322 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 MCHR1Q99705 422 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 PIGQQ9BRB3 760 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 TRIM2Q9C040 744 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 EXO5Q9H790 373 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 PRDM4Q9UKN5 801 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 NINQ8N4C6 2090 aa11.08□□□□□ -0.64
SHMT2-209ENST00000553949 KALRNO60229 2985 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 OR2M5A3KFT3 312 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 EIF4E1BA6NMX2 242 aaKnown RBP11.07□□□□□ -0.64
SHMT2-209ENST00000553949 AQP7O14520 342 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 CIB2O75838 187 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 IFNW1P05000 195 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 EDN3P14138 238 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 CHMP24386 653 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 GCKP35557 465 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 GFRA1P56159 465 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 HSF1Q00613 529 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 OR1Q1Q15612 314 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 NHSL2Q5HYW2 709 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 C1orf146Q5VVC0 180 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 ARHGAP11AQ6P4F7 1023 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 DEF8Q6ZN54 512 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 PLEKHM3Q6ZWE6 761 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 GHDCQ8N2G8 530 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 POP5Q969H6 163 aaKnown RBP11.07□□□□□ -0.64
SHMT2-209ENST00000553949 AMBRA1Q9C0C7 1298 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 TMEM27Q9HBJ8 222 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 SPRR3Q9UBC9 169 aa11.07□□□□□ -0.64
SHMT2-209ENST00000553949 A0A1B0GTH9 108 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 A0A1B0GWA3 101 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 CPSF4LA6NMK7 179 aaKnown RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 LINC01387J3KSC0 135 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 SEMA7AO75326 666 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 ACTL6AO96019 429 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 SEMG1P04279 462 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 BMP7P18075 431 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 IL11P20809 199 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 ELK4P28324 431 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 TACR3P29371 465 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 APOBEC1P41238 236 aaKnown RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 HTR3AP46098 478 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 MERTKQ12866 999 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 ENTPD8Q5MY95 495 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 VASNQ6EMK4 673 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 PRICKLE2Q7Z3G6 844 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 TSPYL5Q86VY4 417 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 SPATA24Q86W54 205 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 PHF10Q8WUB8 498 aaKnown RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 DNAJA4Q8WW22 397 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 ABTB1Q969K4 478 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 RAB3IPQ96QF0 476 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-209ENST00000553949 UGT2B28Q9BY64 529 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 CTPS2Q9NRF8 586 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 TNFRSF10DQ9UBN6 386 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 RPS6KB2Q9UBS0 482 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 OSGIN1Q9UJX0 560 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 ZNF337Q9Y3M9 751 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 AP4B1Q9Y6B7 739 aa11.06□□□□□ -0.64
SHMT2-209ENST00000553949 TMED7-TICAM2A0A0A6YYA0 188 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 A0A0B4J2E0 115 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 A0A1B0GX12 115 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 OR14I1A6ND48 311 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 H3BML4 177 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 hCG_2039718K7EN88 272 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 ZNHIT1O43257 154 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 EFNA2O43921 213 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 NQO1P15559 274 aaKnown RBP11.05□□□□□ -0.64
SHMT2-209ENST00000553949 POU3F2P20265 443 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-209ENST00000553949 YAP1P46937 504 aaKnown RBP11.05□□□□□ -0.64
SHMT2-209ENST00000553949 STARP49675 285 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 POLR2HP52434 150 aaKnown RBP11.05□□□□□ -0.64
SHMT2-209ENST00000553949 TAS2R41P59536 307 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 TLE1Q04724 770 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 CRYZQ08257 329 aaKnown RBP11.05□□□□□ -0.64
SHMT2-209ENST00000553949 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
SHMT2-209ENST00000553949 DCST1Q5T197 706 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms