RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CBLCQ9ULV8 474 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PPIEQ9UNP9 301 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 GNB5O14775 395 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 EEF1E1O43324 174 aaKnown RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CHST10O43529 356 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 MMP11P24347 488 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ADPRHP54922 357 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CLDN2P57739 230 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 VSX2P58304 361 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 OPCMLQ14982 345 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 GSG1Q2KHT4 349 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ITPRIPL2Q3MIP1 535 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 C3P1Q6ZMU1 363 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 RASSF6Q6ZTQ3 369 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 KANSL1Q7Z3B3 1105 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 RAB42Q8N4Z0 105 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 MORN4Q8NDC4 146 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 OR2T35Q8NGX2 323 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 SIPA1Q96FS4 1042 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CACNG6Q9BXT2 260 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ASB6Q9NWX5 421 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D29Q9UFV1 150 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 TINAGQ9UJW2 476 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 POMT2Q9UKY4 750 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 NPTNQ9Y639 398 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 SCN3AQ9NY46 2000 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 SLC22A23A1A5C7 686 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 A8MXK9 166 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 PRODHO43272 600 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 FRS3O43559 492 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 H2AFB2P0C5Z0 115 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 TFPIP10646 304 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 F3P13726 295 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 GALP22466 123 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 AK4P27144 223 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 MTNR1AP48039 350 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 EFNB1P98172 346 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 NDUFA9Q16795 377 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ST3GAL2Q16842 350 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF425Q6IV72 752 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CD300LDQ6UXZ3 194 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 SLC36A4Q6YBV0 504 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 OAFQ86UD1 273 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 OR2L5Q8NG80 312 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 OR4D10Q8NGI6 311 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CCL4L1Q8NHW4 92 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 FAM131CQ96AQ9 280 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 FAIM2Q9BWQ8 316 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 COA4Q9NYJ1 87 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 PFDN2Q9UHV9 154 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 DTX4Q9Y2E6 619 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 GPR55Q9Y2T6 319 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-207ENST00000553837 CHST2Q9Y4C5 530 aa11.37□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3DA0A087WVF3 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3IA0A087WXS9 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3EA0A087X179 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3KA0A087X1G2 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 A0A1W2PQF6 199 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 A0A1W2PRQ8 180 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 SHISA3A0PJX4 238 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3FA6NER0 549 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3LB9A6J9 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 H0Y8X5 98 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 DNAJB6O75190 326 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 ZIC2O95409 532 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-207ENST00000553837 HRGP04196 525 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3HP0C7X1 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF3P17036 446 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 GIFP27352 417 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 NTSP30990 170 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 MC3RP41968 323 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 KHKP50053 298 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 MEOX2P50222 304 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 SMSP52788 366 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3GQ6DHY5 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3CQ6IPX1 549 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 PYHIN1Q6K0P9 492 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 ACSM5Q6NUN0 579 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 SLC48A1Q6P1K1 146 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 LRFN4Q6PJG9 635 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 IQCHQ86VS3 1027 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D3Q8IZP1 549 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF485Q8NCK3 441 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 OR4E2Q8NGC2 313 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 OR4K5Q8NGD3 323 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 OR9A2Q8NGT5 310 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF681Q96N22 645 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 SFXN2Q96NB2 322 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 SPRTNQ9H040 489 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms