RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 FOXD3Q9UJU5 478 aaPredicted RBP18.27■□□□□ 0.52
FOXA1-203ENST00000553751 PACSIN3Q9UKS6 424 aa18.27■□□□□ 0.52
FOXA1-203ENST00000553751 VIMP08670 466 aaKnown RBP18.26■□□□□ 0.51
FOXA1-203ENST00000553751 NID1P14543 1247 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 IL7RP16871 459 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 EEF1A1P68104 462 aaKnown RBP18.26■□□□□ 0.51
FOXA1-203ENST00000553751 SNTB1Q13884 538 aaKnown RBP18.26■□□□□ 0.51
FOXA1-203ENST00000553751 PDSS1Q5T2R2 415 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 MRPL2Q5T653 305 aaKnown RBP18.26■□□□□ 0.51
FOXA1-203ENST00000553751 EEF1A1P5Q5VTE0 462 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 VWA1Q6PCB0 445 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 DLEU7Q6UYE1 221 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 C10orf111Q8N326 155 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 TMEM234Q8WY98 164 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 MAL2Q969L2 176 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 STARD4Q96DR4 205 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 LRRC46Q96FV0 321 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 IKZF5Q9H5V7 419 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 COQ10BQ9H8M1 238 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 ACER3Q9NUN7 267 aa18.26■□□□□ 0.51
FOXA1-203ENST00000553751 LEF1Q9UJU2 399 aaPredicted RBP18.26■□□□□ 0.51
FOXA1-203ENST00000553751 GJE1A6NN92 205 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 SSTR2P30874 369 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 RYKP34925 604 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 MDH1P40925 334 aaKnown RBP18.25■□□□□ 0.51
FOXA1-203ENST00000553751 KIR2DL2P43627 348 aaPredicted RBP18.25■□□□□ 0.51
FOXA1-203ENST00000553751 GNA13Q14344 377 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 TMEM176BQ3YBM2 270 aaPredicted RBP18.25■□□□□ 0.51
FOXA1-203ENST00000553751 PPP4R4Q6NUP7 873 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 C3orf33Q6P1S2 294 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF836Q6ZNA1 936 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 PLEKHM3Q6ZWE6 761 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 LUZP2Q86TE4 346 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 RETREG3Q86VR2 466 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 VRK2Q86Y07 508 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 CNEP1R1Q8N9A8 125 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 OR52P1PQ8NH57 321 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 OSTF1Q92882 214 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 SRXN1Q9BYN0 137 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 KCNN3Q9UGI6 736 aa18.25■□□□□ 0.51
FOXA1-203ENST00000553751 MCTS1Q9ULC4 181 aaKnown RBP18.25■□□□□ 0.51
FOXA1-203ENST00000553751 TACC2O95359 2948 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 A0A0G2JPF8 293 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 TMEM247A6NEH6 219 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 HNRNPCL2B2RXH8 293 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 HNRNPCL3B7ZW38 293 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 AP3D1O14617 1153 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 HNRNPCL1O60812 293 aaKnown RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 SYNGR4O95473 234 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 HNRNPCL4P0DMR1 293 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 PPIBP23284 216 aaKnown RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 ARFIP2P53365 341 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 CARD18P57730 90 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 SIRPAP78324 504 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 MERTKQ12866 999 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 SF3A3Q12874 501 aaKnown RBP eCLIP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF239Q16600 458 aaKnown RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 LIN52Q52LA3 116 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 PRAMEF8Q5VWM4 474 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 PRAMEF7Q5VXH5 474 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 DHDDSQ86SQ9 333 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 DPP10Q8N608 796 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF563Q8TA94 476 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 TSPEARQ8WU66 669 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 CPPED1Q9BRF8 314 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 CCDC106Q9BWC9 280 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 RBM24Q9BX46 236 aaKnown RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 PRRG4Q9BZD6 226 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 SLC24A3Q9HC58 644 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 BCL2L10Q9HD36 194 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF443Q9Y2A4 671 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-203ENST00000553751 NDUFAF1Q9Y375 327 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 POLQO75417 2590 aa18.24■□□□□ 0.51
FOXA1-203ENST00000553751 CDHR4A6H8M9 788 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 ANGPT2O15123 496 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 PEX19P40855 299 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 TLE4Q04727 773 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 GCNT6Q5T4J0 391 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 RNF220Q5VTB9 566 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 FAM214BQ7L5A3 538 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 GRINAQ7Z429 371 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 BTLAQ7Z6A9 289 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 CPNE4Q96A23 557 aaPredicted RBP18.23■□□□□ 0.51
FOXA1-203ENST00000553751 GMPPAQ96IJ6 420 aaPredicted RBP18.23■□□□□ 0.51
FOXA1-203ENST00000553751 RLIMQ9NVW2 624 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 GALNT8Q9NY28 637 aa18.23■□□□□ 0.51
FOXA1-203ENST00000553751 A8MXE2 369 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 FAAHO00519 579 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 MSTNO14793 375 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 SS18L1O75177 396 aaPredicted RBP18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CGAP01215 116 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 THBS1P07996 1170 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 ARAFP10398 606 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 GPX2P18283 190 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 APOBEC1P41238 236 aaKnown RBP18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CPA2P48052 419 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 IDH2P48735 452 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms