RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CNIH4Q9P003 139 aa12.53□□□□□ -0.4
APEX1-205ENST00000553555 ANKUB1A6NFN9 424 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 B4DXG7 233 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 H0YAE9 185 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 GMFGO60234 142 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 CCL3P10147 92 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 CDH2P19022 906 aaPredicted RBP12.52□□□□□ -0.4
APEX1-205ENST00000553555 MST1P26927 711 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 MSX1P28360 303 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 POLR2IP36954 125 aaKnown RBP12.52□□□□□ -0.4
APEX1-205ENST00000553555 IFNGR2P38484 337 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 CAPGP40121 348 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 SLC1A3P43003 542 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 UGT2B15P54855 530 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 SUMO3P55854 103 aaPredicted RBP12.52□□□□□ -0.4
APEX1-205ENST00000553555 KCNAB2Q13303 367 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 TOMM34Q15785 309 aaPredicted RBP12.52□□□□□ -0.4
APEX1-205ENST00000553555 ABHD17BQ5VST6 288 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 NRMQ8IXM6 262 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 ZNF248Q8NDW4 579 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 PIGXQ8TBF5 258 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 GNPDA2Q8TDQ7 276 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 CYGBQ8WWM9 190 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 CCNL2Q96S94 520 aaPredicted RBP12.52□□□□□ -0.4
APEX1-205ENST00000553555 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 PROK2Q9HC23 129 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 HHATLQ9HCP6 504 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 MED11Q9P086 117 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 PPP4R1LQ9P1A2 415 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 POLHQ9Y253 713 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 LRCH1Q9Y2L9 728 aa12.52□□□□□ -0.4
APEX1-205ENST00000553555 A0A087WUJ7 227 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ANKRD33BA6NCL7 494 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 EIF4E1BA6NMX2 242 aaKnown RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 SLC16A6O15403 523 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 EFSO43281 561 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 NUDT14O95848 222 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 RBM34P42696 430 aaKnown RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 OMPP47874 163 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CYB561P49447 251 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 NPRL3Q12980 569 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 MED21Q13503 144 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PRAMEF20Q5VT98 475 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 MDGA2Q7Z553 956 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 ZNF227Q86WZ6 799 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CYP4Z2PQ8N1L4 340 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PARP8Q8N3A8 854 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 GPA33Q99795 319 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 GABARAPL3Q9BY60 117 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 UCK2Q9BZX2 261 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ING2Q9H160 280 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 DSN1Q9H410 356 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 RIBC2Q9H4K1 309 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 C12orf10Q9HB07 376 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ABI3Q9P2A4 366 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 REV1Q9UBZ9 1251 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 HRH3Q9Y5N1 445 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ACACAQ13085 2346 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 E9PQ18 207 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CDK2AP1O14519 115 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 KLK10O43240 276 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PNMTP11086 282 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 GP1BBP13224 206 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CD96P40200 585 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 GSSP48637 474 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PRKCDQ05655 676 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 CDC20Q12834 499 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 COX10Q12887 443 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 QPRTQ15274 297 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 TTC33Q6PID6 262 aaPredicted RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 LSRQ86X29 649 aaPredicted RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 WDSUB1Q8N9V3 476 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 PFN4Q8NHR9 129 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 ANKRD60Q9BZ19 345 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
APEX1-205ENST00000553555 MED31Q9Y3C7 131 aa12.51□□□□□ -0.41
APEX1-205ENST00000553555 APC2O95996 2303 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 LOC100130705A0A1B0GUX0 176 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 KLF4O43474 513 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
APEX1-205ENST00000553555 P04436 131 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 TP53P04637 393 aaPredicted RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 OSMP13725 252 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 PTNP21246 168 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 GSTM3P21266 225 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 TACR3P29371 465 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 CTBP2P56545 445 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms