RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ANKFN1Q8N957 763 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 TOR1AIP2Q8NFQ8 470 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 THUMPD3Q9BV44 507 aaKnown RBP21.21■□□□□ 0.99
TDP1-205ENST00000553527 QRSL1Q9H0R6 528 aaKnown RBP21.21■□□□□ 0.99
TDP1-205ENST00000553527 IKZF5Q9H5V7 419 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 ARL8BQ9NVJ2 186 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 TAGLN3Q9UI15 199 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 L3MBTL1Q9Y468 752 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 GMEB1Q9Y692 573 aa21.21■□□□□ 0.99
TDP1-205ENST00000553527 C7orf72A4D263 438 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 EIF4E2O60573 245 aaKnown RBP21.2■□□□□ 0.98
TDP1-205ENST00000553527 SMNDC1O75940 238 aaKnown RBP eCLIP21.2■□□□□ 0.98
TDP1-205ENST00000553527 H6PDO95479 791 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 EIF1P41567 113 aaKnown RBP21.2■□□□□ 0.98
TDP1-205ENST00000553527 CPA2P48052 419 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 MTPNP58546 118 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 CBFBQ13951 182 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 KRT72Q14CN4 511 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 RGNQ15493 299 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 OR2A2Q6IF42 318 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 FRRS1Q6ZNA5 592 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 METTL25Q8N6Q8 603 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 OR5W2Q8NH69 310 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 OR10D3Q8NH80 312 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 ZNF524Q96C55 264 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 LURAP1Q96LR2 239 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 RBM24Q9BX46 236 aaKnown RBP21.2■□□□□ 0.98
TDP1-205ENST00000553527 P2RX2Q9UBL9 471 aa21.2■□□□□ 0.98
TDP1-205ENST00000553527 A0A0J9YW62 118 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 A0A1W2PNV4 684 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 CXCL13O43927 109 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 KIAA0513O60268 411 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 NR2F1P10589 423 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 SUMO3P55854 103 aaPredicted RBP21.19■□□□□ 0.98
TDP1-205ENST00000553527 CBX1P83916 185 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 QPRTQ15274 297 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 HBMQ6B0K9 141 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 EIF3MQ7L2H7 374 aaKnown RBP21.19■□□□□ 0.98
TDP1-205ENST00000553527 SH3GL1Q99961 368 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 LAT2Q9GZY6 243 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 MCCC2Q9HCC0 563 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 THUMPD1Q9NXG2 353 aaKnown RBP21.19■□□□□ 0.98
TDP1-205ENST00000553527 KCNN3Q9UGI6 736 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 LIPT1Q9Y234 373 aa21.19■□□□□ 0.98
TDP1-205ENST00000553527 GPC6Q9Y625 555 aaPredicted RBP21.19■□□□□ 0.98
TDP1-205ENST00000553527 CREBBPQ92793 2442 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TACC2O95359 2948 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TMEM247A6NEH6 219 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 EFNA2O43921 213 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TNFSF13O75888 250 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 AQP8O94778 261 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 PRKCAP17252 672 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 SHC1P29353 583 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 SLC6A8P48029 635 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 SELPLGQ14242 412 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 FBXL19-AS1Q494R0 122 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 GCNT6Q5T4J0 391 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 NANOGP8Q6NSW7 305 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 VWA1Q6PCB0 445 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 ESPNLQ6ZVH7 1005 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TRPM8Q7Z2W7 1104 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 TMEM200AQ86VY9 491 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 OR8J3Q8NGG0 315 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 SAP130Q9H0E3 1048 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 NANOGQ9H9S0 305 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 SLC24A3Q9HC58 644 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 POLE3Q9NRF9 147 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 CRIM1Q9NZV1 1036 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 JKAMPQ9P055 326 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 FOXD3Q9UJU5 478 aaPredicted RBP21.18■□□□□ 0.98
TDP1-205ENST00000553527 PACSIN3Q9UKS6 424 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 ZNF175Q9Y473 711 aa21.18■□□□□ 0.98
TDP1-205ENST00000553527 CLDN24A6NM45 220 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 BCAS1O75363 584 aaPredicted RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 SYNGR4O95473 234 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 CHRM4P08173 479 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 GPX2P18283 190 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 RYKP34925 604 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 CPOXP36551 454 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 SKP2Q13309 424 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 FGFBP1Q14512 234 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 CTU2Q2VPK5 515 aaKnown RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 TMEM176BQ3YBM2 270 aaPredicted RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 PDSS1Q5T2R2 415 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 HACD2Q6Y1H2 254 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 ARPINQ7Z6K5 226 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 OR2V1Q8NHB1 315 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 LINC01560Q8TB33 94 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 OSTF1Q92882 214 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 STARD4Q96DR4 205 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 KLHL15Q96M94 604 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 TRNT1Q96Q11 434 aaKnown RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 PIGMQ9H3S5 423 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 RNF122Q9H9V4 155 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 MCTS1Q9ULC4 181 aaKnown RBP21.17■□□□□ 0.98
TDP1-205ENST00000553527 CLEC4AQ9UMR7 237 aa21.17■□□□□ 0.98
TDP1-205ENST00000553527 TUBAL3A6NHL2 446 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 ADAMDEC1O15204 470 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms