RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GP1BAP07359 652 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 STSP08842 583 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 CD63P08962 238 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ADORA3P0DMS8 318 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 CD36P16671 472 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 NAGAP17050 411 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 MYL12AP19105 171 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 FUT4P22083 530 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 CALRP27797 417 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 HTR2AP28223 471 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 C21orf33P30042 268 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ACAA2P42765 397 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 MAP2K4P45985 399 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 MTNR1AP48039 350 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 RGS6P49758 472 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 DCDP81605 110 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF91Q05481 1191 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 PIGFQ07326 219 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 DCTN2Q13561 401 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 KCNAB1Q14722 419 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 NSDHLQ15738 373 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SYT16Q17RD7 645 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ISXQ2M1V0 245 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF829Q3KNS6 432 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ALG10BQ5I7T1 473 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM236Q5W0B7 351 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 C19orf48Q6RUI8 117 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 TSSK4Q6SA08 328 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SMARCD3Q6STE5 483 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SLC16A12Q6ZSM3 486 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 USP43Q70EL4 1123 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SLC46A3Q7Z3Q1 461 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 KIF18BQ86Y91 864 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 MISPQ8IVT2 679 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 LNX2Q8N448 690 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 KBTBD8Q8NFY9 601 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 OR9Q1Q8NGQ5 310 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 OR8K3Q8NH51 312 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SLC2A12Q8TD20 617 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF721Q8TF20 911 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM255BQ8WV15 326 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 LIPHQ8WWY8 451 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 S100ZQ8WXG8 99 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SGCDQ92629 289 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 PIGKQ92643 395 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 VMP1Q96GC9 406 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 LRR1Q96L50 414 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 DACH2Q96NX9 599 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 GPA33Q99795 319 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 NUDT22Q9BRQ3 303 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM43Q9BTV4 400 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 SLC26A1Q9H2B4 701 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 GAREM1Q9H706 876 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 PLGRKTQ9HBL7 147 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 INPP5EQ9NRR6 644 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 PNO1Q9NRX1 252 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 FBXO34Q9NWN3 711 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 H2AFY2Q9P0M6 372 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 C19orf25Q9UFG5 118 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 NXT1Q9UKK6 140 aaKnown RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 ICAM5Q9UMF0 924 aa6.72□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM184BQ9Y519 407 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-221ENST00000553498 A0A087WUJ7 227 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 LY6G6EA0A0G2JKS1 128 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 IGHV5-10-1A0A0J9YXX1 117 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 A0A1B0GWA3 101 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 CPED1A4D0V7 1026 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 MYL12BO14950 172 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 IDH3BO43837 385 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 AIREO43918 545 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 PRKYO43930 277 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 PTP4A3O75365 173 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 SCRG1O75711 98 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 DDAH2O95865 285 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 IFNGP01579 166 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 IGKV1D-16P01601 117 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 CFIP05156 583 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 UBL4AP11441 157 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 FGF5P12034 268 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 PEPDP12955 493 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 IFI30P13284 250 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 PRG2P13727 222 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 HTR1FP30939 366 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 SLC6A6P31641 620 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 TGFBR2P37173 567 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 OR1D4P47884 311 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.34
ATXN3-221ENST00000553498 NUDT6P53370 316 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 PNLIPRP2P54317 469 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 NRG3P56975 720 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 ACSM1Q08AH1 577 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 MLLT11Q13015 90 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-221ENST00000553498 EFR3AQ14156 821 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 ERV3-1Q14264 604 aa6.71□□□□□ -1.34
ATXN3-221ENST00000553498 EBPQ15125 230 aaKnown RBP6.71□□□□□ -1.34
ATXN3-221ENST00000553498 SPHARQ15513 63 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms