RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TEX19Q8NA77 164 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 OR52R1Q8NGF1 315 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 RBM18Q96H35 190 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM74BQ9NUR3 256 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SGK494L7N484 410 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PRAMEF2O60811 474 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 IGF2P01344 180 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 IGHV4-34P06331 123 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SBK2P0C263 348 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PRKAR1AP10644 381 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CTSEP14091 401 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PVRP15151 417 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 GALNSP34059 522 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 GPR143P51810 404 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FAM53BQ14153 422 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FGFBP1Q14512 234 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 EXOSC7Q15024 291 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CNIH2Q6PI25 160 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM91Q6ZNR0 172 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 TAF8Q7Z7C8 310 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 OAFQ86UD1 273 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ZFP41Q8N8Y5 198 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 C19orf47Q8N9M1 422 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 OR5T3Q8NGG3 340 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PTP4A1Q93096 173 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PELOQ9BRX2 385 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FOLH1BQ9HBA9 442 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CD93Q9NPY3 652 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 MEPEQ9NQ76 525 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FBXO34Q9NWN3 711 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 DNAJB12Q9NXW2 375 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 IL20RAQ9UHF4 553 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SERTAD3Q9UJW9 196 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 A0A1B0GWA3 101 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 CLDN4O14493 209 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 RGS13O14921 159 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 SSX4O60224 188 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 CTNSO60931 367 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 PPM1BO75688 479 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 SERPINA3P01011 423 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 CD1AP06126 327 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 S1PR1P21453 382 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 EIF2B5Q13144 721 aaKnown RBP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 ISXQ2M1V0 245 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 PRTGQ2VWP7 1150 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 ALG10BQ5I7T1 473 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 HACD4Q5VWC8 232 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 LRRC28Q86X40 367 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF440Q8IYI8 595 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 POMGNT2Q8NAT1 580 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 LSM14AQ8ND56 463 aaKnown RBP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 PATE1Q8WXA2 126 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 RIT1Q92963 219 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 VSTM2LQ96N03 204 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 FRMD6Q96NE9 622 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 KCNJ15Q99712 375 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 TTYH2Q9BSA4 534 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 SLC19A3Q9BZV2 496 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-205ENST00000553474 RNF121Q9H920 327 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 UCK1Q9HA47 277 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 Q9N2J8 555 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 KLHL21Q9UJP4 597 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
SHMT2-205ENST00000553474 GXYLT2A0PJZ3 443 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 NPIPB9F8W1W9 429 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF749O43361 778 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM127O75204 238 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 MYL9P24844 172 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 HLA-DMAP28067 261 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 TALDO1P37837 337 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 MLLT3P42568 568 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ACAA2P42765 397 aaKnown RBP11.9□□□□□ -0.5
SHMT2-205ENST00000553474 EMDP50402 254 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ACTA2P62736 377 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ACTG2P63267 376 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 PLAURQ03405 335 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 STX4Q12846 297 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 GGTLC2Q14390 218 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 QPRTQ15274 297 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF362Q5T0B9 420 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms