RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 B3GNTL1Q67FW5 361 aaPredicted RBP16.04■□□□□ 0.16
PSEN1-206ENST00000553447 TMEM81Q6P7N7 255 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 MEX3DQ86XN8 651 aaKnown RBP16.04■□□□□ 0.16
PSEN1-206ENST00000553447 C8orf59Q8N0T1 100 aaPredicted RBP16.04■□□□□ 0.16
PSEN1-206ENST00000553447 PFN4Q8NHR9 129 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 GATA6Q92908 595 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 ZNF524Q96C55 264 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 ATP13A2Q9NQ11 1180 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 SDHAF3Q9NRP4 125 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 PPP4R1LQ9P1A2 415 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 NDRG4Q9ULP0 352 aaKnown RBP16.04■□□□□ 0.16
PSEN1-206ENST00000553447 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 GMPPBQ9Y5P6 360 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 WIF1Q9Y5W5 379 aa16.04■□□□□ 0.16
PSEN1-206ENST00000553447 A0A087WUJ7 227 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 IGLV3-32A0A0A0MS00 114 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 C2orf72A6NCS6 295 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 ANKUB1A6NFN9 424 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 NUDT14O95848 222 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 TP53P04637 393 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 PNMTP11086 282 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 FPR3P25089 353 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 SLC1A3P43003 542 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 GPR4P46093 362 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 RPS6KA3P51812 740 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CHN2P52757 468 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CRISP1P54107 249 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 SUMO3P55854 103 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CTBP2P56545 445 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 SNTA1Q13424 505 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 TBC1D25Q3MII6 688 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 ACER2Q5QJU3 275 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 TTC33Q6PID6 262 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 Q6ZPB1 254 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 ATG4DQ86TL0 474 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 LSRQ86X29 649 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-206ENST00000553447 GPR119Q8TDV5 335 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 HRASLS5Q96KN8 279 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 ADAM19Q9H013 955 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 C12orf10Q9HB07 376 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 HHATLQ9HCP6 504 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 SH2D2AQ9NP31 389 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 PNPLA3Q9NST1 481 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 WDR70Q9NW82 654 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 HPF1Q9NWY4 346 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CNIH4Q9P003 139 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 KLK13Q9UKR3 277 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 TMEM5Q9Y2B1 443 aa16.03■□□□□ 0.16
PSEN1-206ENST00000553447 CEP250Q9BV73 2442 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 ELOA3DA6NLF2 546 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 KPNA4O00629 521 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 SOX14O95416 240 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 GP1BBP13224 206 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 IFI30P13284 250 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 CHMP24386 653 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 MSX1P28360 303 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 MYBPC1Q00872 1141 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 FOXC1Q12948 553 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 SRSF6Q13247 344 aaKnown RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 RAPSNQ13702 412 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 QPRTQ15274 297 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 TOMM34Q15785 309 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 ELOA3BQ3SY89 546 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 ATP1A1-AS1Q5TC04 95 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 ZNF468Q5VIY5 522 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 SLC30A6Q6NXT4 461 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 RTL4Q6ZR62 310 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 THAP5Q7Z6K1 395 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 GPALPP1Q8IXQ4 340 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 SETD9Q8NE22 299 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 ELOA3Q8NG57 546 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 PAQR8Q8TEZ7 354 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 APOL4Q9BPW4 351 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 MEPEQ9NQ76 525 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-206ENST00000553447 C20orf141Q9NUB4 165 aa16.02■□□□□ 0.16
PSEN1-206ENST00000553447 MPDZO75970 2070 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 ZAR1LA6NP61 321 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 B4DXG7 233 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 GNB5O14775 395 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 CDC40O60508 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
PSEN1-206ENST00000553447 LYNP07948 512 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 IGFBP1P08833 259 aaPredicted RBP16.01■□□□□ 0.15
PSEN1-206ENST00000553447 CCL3P10147 92 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 MAKP20794 623 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 ITGA3P26006 1051 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 POU1F1P28069 291 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 TACR3P29371 465 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 GGT2P36268 569 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 CLN3Q13286 438 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 PTGES3Q15185 160 aaKnown RBP16.01■□□□□ 0.15
PSEN1-206ENST00000553447 PRAMEF20Q5VT98 475 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 OR5M10Q6IEU7 315 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 RASSF6Q6ZTQ3 369 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 TMPRSS11FQ6ZWK6 438 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 KIF18BQ86Y91 864 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 CDK20Q8IZL9 346 aa16.01■□□□□ 0.15
PSEN1-206ENST00000553447 BEST3Q8N1M1 668 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms