RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, human

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP1A-210	ENST00000551981	RAD51D	O75771	328 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	IGHV4-31	P0DP07	118 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NEFH	P12036	1026 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	HNF1A	P20823	631 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CD40	P25942	277 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	HPCAL1	P37235	193 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CCR4	P51679	360 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	EFNA4	P52798	201 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ATP12A	P54707	1039 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	RPL38	P63173	70 aa	Known RBP	12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CSNK2A1	P68400	391 aa	Predicted RBP	12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	LSM11	P83369	360 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CHRNE	Q04844	493 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	MLC1	Q15049	377 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	QPRT	Q15274	297 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	DCST2	Q5T1A1	773 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FBXW9	Q5XUX1	488 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CDC73	Q6P1J9	531 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	OR52N5	Q8NH56	324 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CLHC1	Q8NHS4	586 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ADAMTS15	Q8TE58	950 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FCRL1	Q96LA6	429 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	INPP5K	Q9BT40	448 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ACTRT3	Q9BYD9	372 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SERINC1	Q9NRX5	453 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	KCNS2	Q9ULS6	477 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FAF1	Q9UNN5	650 aa	Predicted RBP	12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TMED5	Q9Y3A6	229 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	DTNA	Q9Y4J8	743 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PMF1-BGLAP	U3KQ54	211 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	MALRD1	Q5VYJ5	2156 aa		12.5	□□□□□ -0.41
CHMP1A-210	ENST00000551981	HEATR1	Q9H583	2144 aa	Known RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NPIPA5	A0A0B4J1W7	369 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NPIPA7	E9PJI5	369 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981		M0R1B8	84 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ETV2	O00321	342 aa	Predicted RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CHEK2	O96017	543 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NPIPA8	P0DM63	369 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	UBL4A	P11441	157 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	EDNRA	P25101	427 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	RPL3	P39023	403 aa	Known RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	DIO1	P49895	249 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	DNAJB13	P59910	316 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SPOCK1	Q08629	439 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NDUFAF6	Q330K2	333 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TIGD2	Q4W5G0	525 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	3e-8	■■■■■ 30.7
CHMP1A-210	ENST00000551981	CLEC6A	Q6EIG7	209 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	OR7E24	Q6IFN5	339 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FAM166A	Q6J272	317 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ARIH2OS	Q8N7S6	290 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	OR56A1	Q8NGH5	318 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ZNF75CP	Q92670	426 aa	Predicted RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	APH1A	Q96BI3	265 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ZHX1-C8orf76	Q96EF9	292 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ANKZF1	Q9H8Y5	726 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FKRP	Q9H9S5	495 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TNFRSF12A	Q9NP84	129 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ASB6	Q9NWX5	421 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	BAIAP2L1	Q9UHR4	511 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	EMCN	Q9ULC0	261 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NOSIP	Q9Y314	301 aa	Known RBP	12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PTGDR2	Q9Y5Y4	395 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SLC25A15	Q9Y619	301 aa		12.49	□□□□□ -0.41
CHMP1A-210	ENST00000551981	IGKV3D-15	A0A087WSY6	115 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SULT2B1	O00204	365 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	AZIN1	O14977	448 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	GLRA3	O75311	464 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	H6PD	O95479	791 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	IGHV3-9	P01782	118 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	EFNA1	P20827	205 aa	Predicted RBP	12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	IGFBP5	P24593	272 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ECHS1	P30084	290 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CCT3	P49368	545 aa	Known RBP	12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TP53BP2	Q13625	1128 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PDK3	Q15120	406 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CCDC153	Q494R4	210 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SPDYE7P	Q495Y7	208 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ABLIM2	Q6H8Q1	611 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	B3GLCT	Q6Y288	498 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TMPPE	Q6ZT21	453 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TMEM234	Q8WY98	164 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ST8SIA1	Q92185	356 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	CHODL	Q9H9P2	273 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TAS2R16	Q9NYV7	291 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	SPIN1	Q9Y657	262 aa	Predicted RBP	12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	FKBP7	Q9Y680	259 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	ATP23	Q9Y6H3	246 aa		12.48	□□□□□ -0.41
CHMP1A-210	ENST00000551981	LOC100289279	A0A1B0GTE1	492 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	TMEM114	B3SHH9	223 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NPIPB9	F8W1W9	429 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	NDUFS8	O00217	210 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	GPR171	O14626	319 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PROC	P04070	461 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	PDLIM4	P50479	330 aa		12.47	□□□□□ -0.41
CHMP1A-210	ENST00000551981	MERTK	Q12866	999 aa		12.47	□□□□□ -0.41

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