RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 GTPBP2Q9BX10 602 aaKnown RBP19.23■□□□□ 0.67
PRDM4-205ENST00000550376 MAGEB3O15480 346 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 ICOSLGO75144 302 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 WISP1O95388 367 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 GYPBP06028 91 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 NOS3P29474 1203 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 ATP6V1E1P36543 226 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 SLC16A1P53985 500 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 ELAVL1Q15717 326 aaKnown RBP19.23■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF829Q3KNS6 432 aaPredicted RBP19.23■□□□□ 0.67
PRDM4-205ENST00000550376 TMPRSS11FQ6ZWK6 438 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 CYP4Z2PQ8N1L4 340 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 OR7G1Q8NGA0 311 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 OR52L1Q8NGH7 329 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 STT3BQ8TCJ2 826 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 LCORQ96JN0 433 aaPredicted RBP19.23■□□□□ 0.67
PRDM4-205ENST00000550376 SLC46A1Q96NT5 459 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 DUSP23Q9BVJ7 150 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 KHNYNO15037 678 aaKnown RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 POLR1CO15160 346 aaPredicted RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 SCG5P05408 212 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 FOXK2Q01167 660 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 ULK3Q6PHR2 472 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 CXXC5Q7LFL8 322 aaKnown RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 EGFL6Q8IUX8 553 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 LSMEM1Q8N8F7 131 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 OR51G2Q8NGK0 314 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 BRIX1Q8TDN6 353 aaKnown RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 CCDC74BQ96LY2 380 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 OR51V1Q9H2C8 321 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 PRMT8Q9NR22 394 aaPredicted RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 C14orf105Q9NVL8 296 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 CCDC163A0A0D9SF12 145 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 DYRK3O43781 588 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 HOXA6P31267 233 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 FHL1Q13642 323 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 PHF19Q5T6S3 580 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 LCN10Q6JVE6 187 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 C16orf87Q6PH81 154 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 POMZP3Q6PJE2 187 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF550Q7Z398 422 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 PROKR2Q8NFJ6 384 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 OR5M3Q8NGP4 307 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 PTP4A1Q93096 173 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 BCL7BQ9BQE9 202 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 PELOQ9BRX2 385 aaKnown RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 UBQLN4Q9NRR5 601 aa19.22■□□□□ 0.67
PRDM4-205ENST00000550376 SPIN1Q9Y657 262 aaPredicted RBP19.22■□□□□ 0.67
PRDM4-205ENST00000550376 GTPBP1O00178 669 aaKnown RBP19.21■□□□□ 0.67
PRDM4-205ENST00000550376 PTP4A3O75365 173 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 SOX30O94993 753 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 LIMS3P0CW19 117 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 LIMS4P0CW20 117 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 MYL12AP19105 171 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 EBPQ15125 230 aaKnown RBP19.21■□□□□ 0.67
PRDM4-205ENST00000550376 KLHL22Q53GT1 634 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 SIRT6Q8N6T7 355 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 C6orf62Q9GZU0 229 aaPredicted RBP19.21■□□□□ 0.67
PRDM4-205ENST00000550376 MCCC2Q9HCC0 563 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 OCIAD1Q9NX40 245 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 H2AFY2Q9P0M6 372 aaPredicted RBP19.21■□□□□ 0.67
PRDM4-205ENST00000550376 IMPA2O14732 288 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 TGM4P49221 684 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 COPZ1P61923 177 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 RAB40BQ12829 278 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF791Q3KP31 576 aaPredicted RBP19.21■□□□□ 0.67
PRDM4-205ENST00000550376 MAMSTRQ6ZN01 415 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 MARCH3Q86UD3 253 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 CARFQ8N187 725 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 MCFD2Q8NI22 146 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 ART5Q96L15 291 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF426Q9BUY5 554 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 TEX12Q9BXU0 123 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 RACGAP1Q9H0H5 632 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 TOR4AQ9NXH8 423 aa19.21■□□□□ 0.67
PRDM4-205ENST00000550376 SCDO00767 359 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 SCRG1O75711 98 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 IL33O95760 270 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 LALBAP00709 142 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 GALNSP34059 522 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 ZNF362Q5T0B9 420 aaPredicted RBP19.2■□□□□ 0.66
PRDM4-205ENST00000550376 KMT5CQ86Y97 462 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 C3orf49Q96BT1 292 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 DEPDC7Q96QD5 511 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 WDR70Q9NW82 654 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 MPDZO75970 2070 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 HMGN1P05114 100 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 MRPL3P09001 348 aaKnown RBP19.2■□□□□ 0.66
PRDM4-205ENST00000550376 BMP4P12644 408 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 CTBP2P56545 445 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 ITGADQ13349 1161 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 TRIM61Q5EBN2 209 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 LINC00114Q6XXX2 140 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 PHC2Q8IXK0 858 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 OR51L1Q8NGJ5 315 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 SECISBP2Q96T21 854 aaKnown RBP19.2■□□□□ 0.66
PRDM4-205ENST00000550376 PRRG3Q9BZD7 231 aa19.2■□□□□ 0.66
PRDM4-205ENST00000550376 SUSD2Q9UGT4 822 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms